Thermobifida alba: FOF52_03725
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Entry
FOF52_03725 CDS
T08159
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
talx
Thermobifida alba
Pathway
talx03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
talx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
FOF52_03725
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
talx03400
]
FOF52_03725
Enzymes [BR:
talx01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
FOF52_03725
DNA repair and recombination proteins [BR:
talx03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
FOF52_03725
Prokaryotic type
FOF52_03725
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
PTHB1_CtH
Motif
Other DBs
NCBI-ProteinID:
UPT20186
LinkDB
All DBs
Position
complement(808259..808933)
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AA seq
224 aa
AA seq
DB search
MSRPLHEIMDSGWAEALAPVADRIAQMGDFLRQEVAEGRTYLPAGENVLRAFRQPFEEVR
VLLVGQDPYPTPGHAVGLSFSVSPETRRLPGSLRNIFTEYTQDLGYPMPSSGDLTPWAER
GVLLLNRVLTVAPRKAGSHRGKGWEEVTDQAIRALAARDKPLVAILWGRDARNLRPLMPH
VPCVESTHPSPMSAHNGFFGSRPFSRANALLEKQGAEPMDWRLP
NT seq
675 nt
NT seq
+upstream
nt +downstream
nt
atgtcgagaccgttgcacgagatcatggacagcggctgggccgaggcgctggcgccggtg
gccgaccgcatcgcgcagatgggcgacttcctgcggcaggaggtggccgagggccgcacc
tacctgcccgccggggagaacgtgctgcgcgccttccggcagcccttcgaggaggtgcgg
gtgctgctggtggggcaggacccctaccccaccccggggcacgccgtggggttgagcttc
tcggtgtcgccggagacccgccgcctgccgggcagcctgcgcaacatcttcaccgagtac
acccaggacctggggtacccgatgccgtccagcggggacctcaccccgtgggccgaacgc
ggggtgctgctgctcaacagggtgctgaccgtcgcgccgcgcaaggcggggtcgcaccgc
ggcaagggctgggaggaggtcaccgatcaggcgatccgcgcgctggccgcccgcgacaag
cccctggtcgcgatcctgtggggccgcgacgcccgcaacctgcgccccctcatgccgcac
gtgccgtgcgtggagtccacccaccccagcccgatgtcggcgcacaacggcttcttcggc
tcccgcccgttcagccgcgccaacgccctgctggagaagcagggcgccgaaccgatggac
tggcgcctgccgtaa
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