Thermobifida alba: FOF52_03945
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Entry
FOF52_03945 CDS
T08159
Name
(GenBank) RtcB family protein
KO
K14415
tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:
6.5.1.8
]
Organism
talx
Thermobifida alba
Brite
KEGG Orthology (KO) [BR:
talx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
talx03016
]
FOF52_03945
Enzymes [BR:
talx01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.8 3'-phosphate/5'-hydroxy nucleic acid ligase
FOF52_03945
Transfer RNA biogenesis [BR:
talx03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
FOF52_03945
Prokaryotic type
tRNA splicing ligases
FOF52_03945
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RtcB
Motif
Other DBs
NCBI-ProteinID:
UPT20222
UniProt:
A0ABY4L2C6
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All DBs
Position
859869..861056
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AA seq
395 aa
AA seq
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MPYTEVPGARVPIRMWTDPNTVEQQAMEQLHNVTTLPWVHGLAVMPDVHYGKGATVGSVI
AMRDAVSPAAVGVDIGCGMTAVRTSLRAEDLPDDLRKLRSGLERAVPVGHAAHRDPVDVR
RVPEVRSRDWDAFWARFDTLAEGVRDRRERAACQMGTLGGGNHFLEVCLDDDGAVWVVLH
SGSRNIGNELAKYHIDRARELPHNQDLPDRDLAVFVAGTPEMEAYRRDLFWAQEYARRNR
EVMMGLACGVLREQFPGVEFPEWISCHHNYVAEETYDGVDVLVTRKGAIRAGRGDLGIIP
GSMATGTYIVRGLGNPASYNSASHGAGRRMSRTRARKTFTQADLVEQTRGVECRKDLGVV
DEIPAAYKDINEVIAAQTDLVEVVTHLRQVVCVKG
NT seq
1188 nt
NT seq
+upstream
nt +downstream
nt
atgccctacaccgaggttccgggagcgcgcgtcccgatccggatgtggaccgacccgaac
acggtggagcagcaggccatggagcagctccacaacgtcaccacgctgccgtgggtgcac
gggctggccgtcatgccggacgtgcactacggcaagggcgccaccgtcggctcggtcatc
gcgatgcgcgacgcggtctccccggccgccgtcggcgtcgacatcggctgcggcatgacc
gcggtgcggacctcgctgcgtgccgaggacctgcccgacgacctgcggaagctgcggtcc
gggctggagcgggcggtccccgtcggccacgccgcgcaccgcgaccccgtcgacgtgcgc
cgcgtcccggaggtgcgcagccgcgactgggacgcgttctgggcccggttcgacaccctc
gccgagggggtgcgcgaccgccgcgagcgcgccgcctgccagatgggcaccctcggcggc
ggcaaccacttcctggaggtgtgcctggacgacgacggcgcggtgtgggtggtgctgcac
tccgggtcgcgcaacatcggcaacgaactggccaagtaccacatcgaccgggcccgcgaa
ctgccgcacaaccaggacctgcccgaccgcgacctcgcggtgttcgtcgcgggcacgccc
gagatggaggcctaccgccgcgacctgttctgggcgcaggagtacgcgcgccgcaaccgc
gaggtgatgatgggcctggcctgcggtgtgctgcgcgagcagttccccggggtggagttc
cccgagtggatctcctgccaccacaactacgtggcggaggagacctacgacggcgtcgac
gtgctcgtcacccgcaagggcgcgatccgcgctggccgcggcgacctggggatcatcccc
ggatcgatggccaccggcacctacatcgtgcgcggcctgggcaacccggcgtcgtacaac
tccgcctcgcacggcgcgggccgccgcatgagccggacccgggcccgcaagaccttcacc
caggccgacctggtcgaacagaccaggggagtggagtgccgcaaggatctcggcgtggtc
gatgagatccccgcggcgtacaaggacatcaacgaggtgatcgccgcccagactgatctt
gtggaagtggtgacgcacctgcggcaagtggtgtgcgtcaaggggtga
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