Thermobifida alba: FOF52_11950
Help
Entry
FOF52_11950 CDS
T08159
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
talx
Thermobifida alba
Pathway
talx00260
Glycine, serine and threonine metabolism
talx00460
Cyanoamino acid metabolism
talx00630
Glyoxylate and dicarboxylate metabolism
talx00670
One carbon pool by folate
talx00680
Methane metabolism
talx01100
Metabolic pathways
talx01110
Biosynthesis of secondary metabolites
talx01120
Microbial metabolism in diverse environments
talx01200
Carbon metabolism
talx01230
Biosynthesis of amino acids
talx01240
Biosynthesis of cofactors
talx04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
talx00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
FOF52_11950
09102 Energy metabolism
00680 Methane metabolism
FOF52_11950
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
FOF52_11950
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
FOF52_11950
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
FOF52_11950
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
FOF52_11950
Enzymes [BR:
talx01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
FOF52_11950
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SHMT
Beta_elim_lyase
Aminotran_1_2
Cys_Met_Meta_PP
Aminotran_5
SelA
Motif
Other DBs
NCBI-ProteinID:
UPT21571
UniProt:
A0ABY4L1M1
LinkDB
All DBs
Position
2718226..2719497
Genome browser
AA seq
423 aa
AA seq
DB search
MTAQSNPLNQSLAQLDPEVAAAVDAELARQRDTLEMIASENFAPQAVLEAQGTVLTNKYA
EGYPGRRYYGGCEHVDVVEQLAIDRAKALFGAEHANVQPHSGAQANTAVYFALLQPGDTI
LGLDLAHGGHLTHGMRINYSGKILNAVAYHVRESDGLVDYDEVEALAKEHQPKLIIAGWS
AYPRQLDFARFRQIADQTGALLMVDMAHFAGLVAAGLHPNPVPYADVVTTTTHKTLGGPR
GGLILAKAELGKKINSAVFPGMQGGPLEHVIAAKAVALKVAATEEFAERQRRTLSGAKIL
AERLTRPDAAEAGIRVLSGGTDVHLVLVDLVNSQLNGQEAEDRLHEIGITVNRNAVPNDP
RPPMVTSGLRIGTPALATRGFGDADFTEVADIIAEALKPEFDAEALRARVRALAAKHPLY
PGL
NT seq
1272 nt
NT seq
+upstream
nt +downstream
nt
atgaccgcccagagcaatccgctcaaccagtcgctggcgcagctcgacccggaggtcgcg
gccgccgtggacgccgagctcgcccgccagcgcgacaccctggagatgatcgcctccgag
aacttcgccccgcaggcggtcctggaggcacagggaacggtcctgaccaacaagtacgcc
gagggctacccgggccgccgctactacggcgggtgtgagcacgtcgacgtcgtcgagcag
ctggccatcgaccgggccaaggcgctgttcggcgccgagcacgccaacgtgcagccgcac
tcgggggcgcaggccaacaccgccgtgtacttcgcgctgctgcagccgggcgacaccatc
ctgggcctggacctggcccacggcgggcacctgacgcacggcatgcggatcaactactcg
ggcaagatcctcaacgccgtggcctaccacgtgcgcgagtccgacggcctggtcgactac
gacgaggtcgaggcgctggccaaggagcaccagccgaagctgatcatcgcgggctggtcg
gcctacccgcgccagctggacttcgcccgcttccggcagatcgccgaccagacgggcgcc
ctgctcatggtggacatggcgcacttcgccggcctggtcgcggcgggcctgcaccccaac
ccggtgccctacgccgacgtggtgaccaccaccacgcacaagacgctgggcggtccgcgc
ggcgggctcatcctggccaaggcggagctgggcaagaagatcaactccgcggtgttcccg
ggcatgcagggcggtccgctggagcacgtgatcgccgccaaggcggtggcgttgaaggtc
gcggcgaccgaggagttcgccgagcggcagcggcgcaccctgtcgggcgcgaagatcctc
gccgagcgcctcacccggcccgacgccgccgaggccggcatccgcgtgctgagcgggggc
accgacgtgcacctggtcctggtcgacctggtcaactcccagctcaacggtcaggaggcg
gaggaccggctgcacgagatcggcatcacggtcaaccgcaacgccgtgcccaacgacccg
cggccgcccatggtcacctcgggtctgcgcatcggcaccccggccctggccacccgcggc
ttcggcgacgccgacttcaccgaggtcgccgacatcatcgccgaggcgctcaagccggag
ttcgacgccgaggcgctgcgtgcccgggtccgggcgctcgccgccaagcacccgctctac
ccggggctgtga
DBGET
integrated database retrieval system