Thermobifida alba: FOF52_13465
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Entry
FOF52_13465 CDS
T08159
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
talx
Thermobifida alba
Pathway
talx03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
talx00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
FOF52_13465
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
talx03021
]
FOF52_13465
03400 DNA repair and recombination proteins [BR:
talx03400
]
FOF52_13465
Enzymes [BR:
talx01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
FOF52_13465
Transcription machinery [BR:
talx03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
FOF52_13465
DNA repair and recombination proteins [BR:
talx03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
FOF52_13465
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
HHH_5
AbiEi_4
SAM_EPH
Motif
Other DBs
NCBI-ProteinID:
UPT21834
LinkDB
All DBs
Position
complement(3076985..3078001)
Genome browser
AA seq
338 aa
AA seq
DB search
MLIAQRPTLTEESISEFRSKFVIEPLEPGFGYTIGNSLRRTLLSSIPGAAVTSIRIEGVE
HEFTTVPGIKEDVTEMILNLKGLVVSSEHDEPVLMYLRKQGPGVVTAADIAPPAGVEVHN
PDLHIATLNGKGKLEMEMTVERGRGYVSAAQNKQPGQEIGRIPIDSIYSPVMRVTYKVEA
TRVEQRTDFDRLILDVWTKPAIRPRDAVASAGKTLVELFGLARELNVDAEGIDMGPSPTD
AALAADLALPIEDLNLTVRSYNCLKREGIHTVGELVARSEQDLLDIRNFGAKSIEEVKQK
LTDMGLSLKDSPPGFDPGSAADSYGSDDDQSYVETEQY
NT seq
1017 nt
NT seq
+upstream
nt +downstream
nt
atgctgatcgctcagcgtcccaccctgaccgaggagtcgatctccgagttccgctccaag
ttcgtcatcgaacccctggagccgggattcggctacaccatcgggaactcgctgcgccgt
accctgctgtcgtccatccccggtgccgctgtcaccagcatccgcatcgagggcgtcgag
cacgagttcaccaccgtgcccggcatcaaggaggacgtcaccgagatgatcctgaacctc
aagggtctcgtggtgagctccgagcacgacgagccggtgctgatgtacctgcgcaagcag
ggcccgggagtggtcaccgccgctgacatcgctccgcccgccggggtcgaggtgcacaat
cccgacctgcacatcgcgaccctgaacggcaagggcaagctggagatggagatgacggtc
gagcgcggccgcggctacgtctccgccgcccagaacaagcagcccggtcaggagatcggc
cggatcccgatcgactcgatctactccccggtcatgcgggtcacctacaaggtcgaggcg
acccgagtcgagcagcgcaccgacttcgaccgcctcatcctggacgtctggaccaagccg
gccatccggccccgggacgcggtggcgagcgcgggcaagaccctggtggagctgttcggg
ctggcccgggagctcaacgtcgacgccgagggcatcgacatgggcccctctcccacggac
gccgcgctggccgcggacctggcactgcccatcgaggacctcaacctcacggtccgctcc
tacaactgcctcaagcgcgaaggcatccacaccgtcggcgaactcgtcgcccgctccgag
caggacctcctggacattcgcaacttcggtgcgaagtcaatagaggaagtcaagcagaag
ctgaccgacatggggctctccctgaaggactccccgcccggattcgacccggggagcgcg
gccgactcctacggttccgacgacgaccagtcctacgtcgagaccgagcagtactaa
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