Thermobifida alba: FOF52_13640
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Entry
FOF52_13640 CDS
T08159
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
talx
Thermobifida alba
Pathway
talx03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
talx00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
FOF52_13640
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
talx03021
]
FOF52_13640
03400 DNA repair and recombination proteins [BR:
talx03400
]
FOF52_13640
Enzymes [BR:
talx01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
FOF52_13640
Transcription machinery [BR:
talx03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
FOF52_13640
DNA repair and recombination proteins [BR:
talx03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
FOF52_13640
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Cas_Cas2CT1978
RPN1_C
Motif
Other DBs
NCBI-ProteinID:
UPT21867
LinkDB
All DBs
Position
complement(3101143..3105018)
Genome browser
AA seq
1291 aa
AA seq
DB search
MLDANFFDELRIGLATADDIRQWSHGEVKKPETINYRTLKPEKDGLFCEKIFGPTRDWEC
YCGKYKRVRFKGIICERCGVEVTRAKVRRERMGHIELAAPVTHIWYFKGVPSRLGYLLDL
APKDLEKVIYFAAYMVTWVDTEARERDLPSLEARISVERQHLEQRRDSAVEERHRKLEAD
LAELEEQGAKGDARRKVREAAEREMRQIRDRAQREIDRLEEVWNRFKTLKVQDLEGDELL
YREMRDRFGKYFRGGMGAQAIKERLANFDLEAEAEKLRETIRTGKGQKKARALKRLKVVS
AFLNTRNSPMGMVLDCVPVIPPDLRPMVQLDGGRFATSDLNDLYRRVINRNNRLKRLLDL
GAPEIIVNNEKRMLQEAVDALFDNGRRGRPVTGPGNRPLKSLSDMLKGKQGRFRQNLLGK
RVDYSGRSVIVVGPQLKLHQCGLPKQMALELFKPFVMKRLVDLNHAQNIKSAKRMVERSR
PVVWDVLEEVIAEHPVLLNRAPTLHRLGIQAFEPQLVEGKAIQIHPLVCTAFNADFDGDQ
MAVHLPLSAEAQAEARILMLATNNILKPSDGKPVTMPTQDMVIGLYYLTSLKEGAKGEGR
AFSSPGEAIMAYDLGELDLQARIKLRVEGDTVPPEDWEAPEGYQPGQPYVLETTLGRYLF
NETTPEDYPFVNQQMGKKQLSALVTELAERYPKIQVATTLDALKDAGYHWATRSGLTISI
SDVVPPPNKHKILDAYEKEAEKIQRQYERGLISDEERRQDLTDIWTKATNEVARDMEENS
PADNTVWMMVNSGARGNPMQVRQIAGIRGLVSNTKGETIPRPIKSSYREGLSVLEYFIST
HGQRKGLADTALRTADSGYLTRRLVDVAQDVIVREVDCGTDRSLWQEIGERRPDGTVVRK
HNVENTGFGRTLAEDVVVDGEVIATKLSDTTEALIDKLVAAGVTRVRVRSSLVCEAKVGV
CSTCYGRSLATGKPVDVGEAIGIIAAQSIGEPGTQLTMRTFHMGGSAGQDITHGLPRVQE
LFEARIPKGVAPISEVEGRIRIEETEKSRKIILIPDDGSDEIAYPVPMRAPLLVQEGQHV
DVGQKLIQGAVNPHEVLRILGPRAVQQHLVSEVQEVYKSQGVSIHDKHIEIIVRQMLKRV
NVLESGDTKLLPGEMVERPKFEAINRQVVAEGGQPASARPVLLGITKASLATESWLSAAS
FQETTRVLTENAIHGKSDPLLGLKENVIIGKLIPAGTGMPQYRNIRVEPTEEAKASMYSV
SSYEEPSEYTFGQGSGEAVPLEDYDFGPYNR
NT seq
3876 nt
NT seq
+upstream
nt +downstream
nt
gtgctcgacgccaacttcttcgacgagctccggattggcctcgccaccgctgacgacatc
cgccagtggtcgcacggcgaggtcaagaagccggaaaccatcaactaccggaccctcaag
ccggagaaggacgggctcttctgcgagaagatcttcggtccgacccgggactgggagtgc
tactgcggtaagtacaagcgcgtccgcttcaagggcatcatctgcgagcgctgcggtgtc
gaggtcacccgggccaaggtccggcgcgagcggatgggccacatcgagctggccgcgccc
gtgacccacatctggtacttcaagggcgtgcccagccggctgggatacctgctcgacctg
gccccgaaggacctggagaaggtcatctacttcgcggcctacatggtcacctgggtggac
accgaggcccgcgagcgcgacctgccgtccctggaagcccggatctccgtcgaacggcag
cacctggagcagcgtcgcgactctgcggtggaggaacgccaccgcaagctcgaagccgac
ctggccgagctggaggagcagggcgccaagggcgacgcgcgccgcaaggtgcgcgaggcc
gccgagcgggagatgcggcagatccgcgaccgcgcccagcgggagatcgaccgcctcgaa
gaggtctggaaccgcttcaagaccctcaaggtccaggacctcgaaggcgacgagctgctc
taccgcgagatgcgggaccgcttcggcaagtacttccgcggcggcatgggcgcccaggcg
atcaaggagcggctggccaacttcgacctggaggccgaggcggagaagctccgcgagacc
atccgcaccggcaagggccagaagaaggcccgcgccctcaagcggctcaaggtcgtctcg
gcgttcctcaacacccgcaacagcccgatgggcatggtgctggactgcgttccggtgatc
ccgccggacctgcgtccgatggtgcagctcgacggtggccgcttcgccacctccgacctg
aacgacctgtaccgccgggtgatcaaccgcaacaaccggctcaagcggcttctcgacctc
ggtgcgcccgagatcatcgtcaacaacgagaagcgcatgctccaggaggccgtcgacgcg
ctgttcgacaacggccgccgcggccgtccggtcaccggcccgggcaaccgcccgctcaag
tcgctgtccgacatgctcaagggcaagcaggggcggttccgccagaacttgctgggcaag
cgcgtcgactactccggccgttcggtcatcgtggtcggcccgcagctcaagctgcaccag
tgcggcctgcccaagcagatggcgctggagctgttcaagccgttcgtgatgaagcgcctg
gtcgacctgaaccacgcgcagaacatcaagagcgccaagcgcatggtcgagcgctcccgc
ccggtggtgtgggacgtgctcgaagaggtcatcgccgagcacccggtgctgctcaaccgt
gcgccgaccctgcaccgcctgggcatccaggccttcgagccgcagttggtcgaaggcaag
gccatccagatccacccgctcgtgtgcaccgcgttcaacgcggacttcgacggcgaccag
atggcggtccacctgccgctgtcggcggaggcccaggccgaggcgcgcatcctgatgctc
gccacgaacaacatcctgaagccctccgacggcaagccggtcaccatgcccacccaggac
atggtcatcggcctgtactacctgacctccctcaaggagggagcgaagggagagggtcgg
gcgttcagcagccccggcgaggccatcatggcctacgacctgggtgaactcgacctgcag
gcgaggatcaagctgcgtgtcgagggcgacaccgtgccgccggaggactgggaggccccc
gagggctaccagccgggccagccgtacgtgctggagaccaccctcggccggtacctgttc
aacgagaccacgcccgaggactacccgttcgtcaaccagcagatgggcaagaagcagctg
tccgctctggtgaccgaactggccgagcggtaccccaagatccaggtggccaccacgctg
gacgccctcaaggacgccgggtaccactgggccacccgctcgggtctgaccatcagcatc
agcgacgtggtcccgccgccgaacaagcacaagatcctcgacgcctacgagaaggaagcc
gagaagatccagcgccagtacgagcgcggtctgatcagcgacgaggagcgccgccaggac
ctgaccgacatctggaccaaggccaccaacgaggtcgcccgggacatggaggagaactct
cccgccgacaacacggtgtggatgatggtcaactccggtgcccgcggtaaccccatgcag
gtccgccagatcgccggtatccgcggactggtgtccaacaccaagggcgagacgatcccg
cgtccgatcaagtcttcctaccgcgagggcctgtcggtgctggagtacttcatctccacc
cacggtcagcgcaagggtctggcggacacggcgctgcgcaccgccgactccgggtacctc
acccggcgtctggtggacgtcgcccaggacgtcatcgtccgcgaggtcgactgcggcacc
gaccgctccctgtggcaggagatcggcgagcggcgccccgacgggaccgtcgtgcgcaag
cacaacgtcgagaacaccggtttcggccggacgctcgcggaggacgtcgtcgtcgacggc
gaggtcatcgcgaccaagctgagcgacacgaccgaggccctgatcgacaagctggtcgcg
gcgggcgtcacccgggtgcgggtgcgcagttcgctggtgtgcgaggccaaggtgggcgtg
tgcagcacctgctacggccgctccctggccaccggcaagccggtcgacgtcggcgaagcc
atcggcatcatcgccgcgcagtccatcggtgagcccggtacccagctgaccatgcggacc
ttccacatgggcggttcggcgggtcaggacatcacccacggtctgccgcgtgtccaggag
ctgttcgaggcccgcatccccaagggtgtggccccgatcagcgaggtggagggccgcatc
cggatcgaggagaccgagaagagccgtaaaatcatcctcatcccggatgacggctcggac
gagatcgcctacccggtccccatgcgggctccgctgctggtccaggaggggcagcacgtc
gacgtcggccagaagctcatccagggcgccgtcaacccgcacgaggtcctgcggatcctc
ggtccgcgcgcggtgcagcagcacctcgtctccgaggtccaggaggtctacaagtcgcag
ggtgtctcgatccacgacaagcacatcgagatcatcgtgcggcagatgctcaagcgggtg
aacgtcctggagtccggcgacaccaagctgcttccgggcgagatggtcgagcgtcccaag
ttcgaggcgatcaaccgtcaggtcgtggccgaaggcggccagcccgcctcggcccgtccc
gtcctcctcgggatcaccaaggcgtctctggcgacggagtcgtggctgtccgcggcctcc
ttccaggagaccacccgggtgctcaccgagaacgcgatccacggcaagagcgacccgctg
ctcggtctcaaggagaacgtcatcatcggtaagctcatcccggccggtaccggtatgccg
cagtaccgcaacatccgggtcgagcccaccgaggaggccaaggcctcgatgtactcggtg
tcctcctacgaggagcccagcgagtacacgttcggccagggatcgggggaggccgtcccg
ctggaggactacgatttcgggccctacaacaggtga
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integrated database retrieval system
