Thermobifida alba: FOF52_17040
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Entry
FOF52_17040 CDS
T08159
Symbol
gyrB
Name
(GenBank) DNA topoisomerase (ATP-hydrolyzing) subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
talx
Thermobifida alba
Brite
KEGG Orthology (KO) [BR:
talx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
talx03032
]
FOF52_17040 (gyrB)
03400 DNA repair and recombination proteins [BR:
talx03400
]
FOF52_17040 (gyrB)
Enzymes [BR:
talx01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
FOF52_17040 (gyrB)
DNA replication proteins [BR:
talx03032
]
Prokaryotic type
DNA Topoisomerases
FOF52_17040 (gyrB)
DNA repair and recombination proteins [BR:
talx03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
FOF52_17040 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
Toprim
HATPase_c
HATPase_c_3
Motif
Other DBs
NCBI-ProteinID:
UPT22460
UniProt:
A0ABY4L7S3
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All DBs
Position
3859469..3861406
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AA seq
645 aa
AA seq
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MAYDARSITVLEGLEAVRKRPGMYIGSTGERGLHHLVYEVVDNSVDEALAGHATAIEVTL
LADGGVRVADNGRGIPVDPHPVEKRPAVEIVLTTLHAGGKFDSKSYAVSGGLHGVGVSVV
NALSTRLEVEIRKDGYVWTQRYEMTHPVTDLIKGEPTDETGTQITFWADDSIFETTTYNF
ETLSRRLQEMAFLNKGLSITIRDERPEFVGDSPVTQTYHYEGGLADFVRHINATKEPAHS
TIIAFEDSGDGIAAEIAMQWNQSYTSSVHTFANTINTAEGGTHEEGFRAALTSIVNRYAR
DQKLLRDKDDNLTGDDVREGLTAIVSVKLTDPQFEGQTKTKLGNTEAKSFIQKVCHEHLR
DWFDRNPGEAKDIVTKASQAARARIAARQARELTRRKTLLESTSLPGKLADCQSTDPERC
EVYIVEGDSAGGSAKGGRDPHYQAILPIRGKILNVEKARIDRILKNNEVQAIITALGTGV
HDDFDIEKLRYHKIILMADADVDGQHIRTLLLTLLFRFMKPLIEAGYVYLAQPPLYKIKW
DSRGTDVDYAYSDRERDEKIAAGIAAGKKDPRPRDLVQRFKGLGEMNPGELWETTMDPQR
RVLLQVTLDDAAQADEMFSVLMGEDVESRRSFIQRNARDVRFLDI
NT seq
1938 nt
NT seq
+upstream
nt +downstream
nt
ttggcctacgacgcgcgatcaatcacggttctggaaggcctcgaagcggtacgcaaacgc
cccggcatgtacatcggctccacgggcgagcgcggactgcaccaccttgtctacgaggtt
gtggacaactccgtggacgaggcgctcgccggacacgccaccgccatcgaggtcacactg
ctggccgacggcggggttcgggtggccgacaacggacgcggaatcccggtcgacccccac
ccggtggagaagcggcccgcggtggagatcgtcctgaccaccctgcacgcgggcggcaag
ttcgacagcaagtcctacgcggtctccggcggtctgcacggggtcggcgtctccgtcgtc
aacgccctgtccacccggcttgaggtggagatccgcaaagacggatacgtgtggacgcag
cgctacgagatgacccatccggtgaccgatctcatcaagggcgagcccaccgacgagacc
ggtacccagatcaccttctgggccgacgactcgatcttcgagaccaccacctacaacttc
gagaccctgtcgcggcggctccaggagatggccttcctcaacaaggggctgtccatcacc
atccgcgacgagcggcccgagttcgtcggcgactcccccgtcacgcagacctaccactac
gagggcggcctggcggacttcgtccgccacatcaacgcgaccaaggaacccgcacactcc
accatcatcgcgttcgaggactccggcgacggcatcgcggccgagatcgcgatgcagtgg
aaccagtcgtacacctcctcggtgcacaccttcgccaacaccatcaacacggccgagggc
ggcacccacgaggagggcttccgcgcggcgctcacctcgatcgtcaaccgctacgcgcgc
gaccagaaactgctgcgcgacaaggacgacaacctcaccggcgacgacgtccgcgagggg
ctcaccgcgatcgtctcggtcaagctcaccgatccccagttcgagggccagaccaagacc
aagctcggcaacaccgaggccaagtcgttcatccagaaggtgtgccacgagcacctgcgg
gactggtttgaccgcaacccgggcgaggccaaggacatcgtcaccaaggcgagccaggcc
gcacgcgcccggatcgccgcccgccaggcccgggaactcacccggcgcaagacactgctg
gagtccacctcgctgcccggcaaactggcggactgccagtccaccgatccggagcgctgc
gaggtctacatcgtcgagggagactccgcgggcggctccgccaagggcggacgcgacccc
cactaccaggccatcctccccatccgcggcaagatcctcaacgtcgagaaggcccgcatc
gaccggatcctcaagaacaacgaggtccaggcgatcatcacggcgctgggcaccggcgtg
cacgacgacttcgacatcgagaagctgcgttaccacaagatcatcctgatggccgacgcc
gacgtcgacggccagcacatccgcacgctgctgctcaccctgctgttccgcttcatgaaa
ccgctcatcgaagccggatacgtctacctcgcgcagcctccgctctacaagatcaagtgg
gactcccggggcaccgacgtcgactacgcctactccgaccgcgagcgcgacgagaagatc
gccgcgggcatcgccgcgggcaagaaggatccccggccccgcgacctcgtccagcggttc
aagggcctgggcgagatgaaccccggggaactgtgggagaccaccatggacccccagcgc
cgggtgctgctgcaggtgacgctcgacgacgcagcccaggcggacgagatgttcagcgtg
ctcatgggagaggacgtcgagtcgaggcgctccttcattcagcgcaacgcccgggacgtc
cgcttcctggacatctag
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