Thermobifida alba: FOF52_18255
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Entry
FOF52_18255 CDS
T08159
Name
(GenBank) pectate lyase
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
talx
Thermobifida alba
Pathway
talx00040
Pentose and glucuronate interconversions
talx01100
Metabolic pathways
talx02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
talx00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
FOF52_18255
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
FOF52_18255
Enzymes [BR:
talx01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
FOF52_18255
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GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-ProteinID:
UPT22649
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Position
4123181..4124530
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AA seq
449 aa
AA seq
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MRRVVTLGVTLALPLTLVVPGSALARPHHHPGVSPKAERIAREVLAPNDGWAAHGTGTTG
GSAADADQVHVVDSYAALRAALDGGRHNDTPKIVFLKGRIDANTDAQGNRLTCDDYADPE
YDLDAYLAAYHPDVWGWDTEPSGPLEEARERSYQNQREQIVFEVGSNTTIIGLGDDAALV
GAQMMVESVDNVIIRNISFETAQDCFPQWDPTDGAEGNWNSEFDGISVRRSTHVWIDHNE
FSDGDVLDRDLPEYFGREFQVHDGLLDITHGSDLVTVSYNVLRDHDKTMLIGSTDSPTHD
VGKLRVTLHHNRWENVLQRAPRVRYGQVHAYNNHYVVPATPEGEKTYQYSWGVGMESSLY
AENNYFDIDPSVDFSQVVAYWKGTRMYETGSYANGRSRHHRTSFLEAYNAVHTPAIENRA
TWEPQLHGRIDPAQSVPAKVRTAGVGCLL
NT seq
1350 nt
NT seq
+upstream
nt +downstream
nt
atgcgaagagttgtcaccctcggcgtcaccctcgcgctgccgctcacgctggtcgtcccg
ggcagcgccctggcccgtccccaccaccatcccggagtgtcccccaaggccgagcggatc
gcccgcgaggtgctcgcccccaacgacggctgggccgcacacggcaccggcaccaccggg
ggctccgcggccgacgccgaccaggtccacgtcgtcgacagctacgccgcactgcgtgcg
gcgctggacggcggccgccacaacgacacccccaagatcgtcttcctcaaggggcggatc
gacgccaacaccgacgcccagggcaaccggctcacctgcgacgactacgccgaccccgaa
tacgacctggacgcctacctggccgcctaccaccccgacgtctgggggtgggacaccgag
ccgtccggacccctggaagaggcccgggaacgctcctaccagaaccagcgggaacagatc
gtcttcgaggtcggctccaataccaccatcatcggcctcggcgacgacgccgcactggtc
ggcgcgcagatgatggtggagagcgtcgacaacgtcatcatccgcaacatctccttcgag
accgcccaggactgcttcccccagtgggaccccacggacggcgccgagggcaactggaac
tccgagttcgacgggatctcggtgcgccgctccacgcacgtgtggatcgaccacaacgag
ttcagcgacggcgacgtgctcgaccgcgacctgcccgagtacttcggccgcgagttccag
gtccacgacggcctgctggacatcacccacggctccgacctggtcaccgtctcctacaac
gtgctgcgcgaccacgacaagaccatgctgatcggcagcaccgactcacccacccacgac
gtcggcaagctgcgggtcaccctgcaccacaaccgctgggagaacgtgctgcagcgcgcc
ccccgcgtccgctacgggcaggtgcacgcctacaacaaccactacgtggtccccgccacg
cctgagggggagaagacctaccagtactcctggggcgtggggatggagtcgtcgctgtac
gcggagaacaactacttcgacatcgacccgtccgtcgacttctcccaggtcgtcgcctac
tggaagggcacgcggatgtacgagacgggaagctacgccaacggccgctcccggcaccac
cggaccagcttcctggaggcgtacaacgcggtgcacaccccggccatcgagaaccgggcg
acctgggagccccagctccacggccggatcgacccggcccagtcggtgccggcgaaggtg
cgcacggcgggcgtcggctgcctcctctga
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