Thermobifida alba: FOF52_18780
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Entry
FOF52_18780 CDS
T08159
Symbol
thpR
Name
(GenBank) RNA 2',3'-cyclic phosphodiesterase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
talx
Thermobifida alba
Brite
KEGG Orthology (KO) [BR:
talx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
talx03016
]
FOF52_18780 (thpR)
Enzymes [BR:
talx01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
FOF52_18780 (thpR)
Transfer RNA biogenesis [BR:
talx03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
FOF52_18780 (thpR)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
AKAP7_NLS
Motif
Other DBs
NCBI-ProteinID:
UPT23620
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All DBs
Position
4235048..4235596
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AA seq
182 aa
AA seq
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MRLFTAVVPPAAVLDALGTAVEAARPTARALRWAPREQWHVTLLFLGEVPDERVDAVAEE
LGRVAVRHPAMSLSLRGGGTFPTKPVRSRVLWAGLDGDTEALTALANDLRDAAAGLGIPV
EDRRYTPHLTVARARITTNLTAPHARLDTLATEPWRAGEVHLVHSRLGGTPRYRTIATWE
LA
NT seq
549 nt
NT seq
+upstream
nt +downstream
nt
atgcgcctgttcaccgctgtcgtcccgcccgccgccgtgctcgacgccctgggcacggcg
gtggaggccgcgcgtcccacggcccgcgccctgcgctgggcgccccgcgagcagtggcac
gtgacgctgctgttcctcggcgaggtgccggacgaacgggtcgacgcggtggccgaggag
ctgggccgggtggccgtccggcatcccgcgatgtccctcagcctgcgcggcggcggcacc
ttcccgacgaaaccggtccgctcccgcgtcctgtgggcgggactggacggggacaccgag
gccctgaccgcgctggcgaacgacctgcgcgacgccgccgccggactcggcatcccggtg
gaggaccgccgctacaccccgcacctgaccgtggcccgcgcccgcatcaccaccaacctc
accgccccgcacgcccgcctcgacaccctggccaccgagccctggcgggcgggcgaggtg
cacctggtgcacagccgactgggcggcaccccccggtaccggaccatcgccacctgggaa
ctagcctga
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