Thermobifida alba: FOF52_18870
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Entry
FOF52_18870 CDS
T08159
Symbol
xth
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
talx
Thermobifida alba
Pathway
talx03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
talx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
FOF52_18870 (xth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
talx03400
]
FOF52_18870 (xth)
Enzymes [BR:
talx01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
FOF52_18870 (xth)
DNA repair and recombination proteins [BR:
talx03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
FOF52_18870 (xth)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Exo_endo_phos_2
Motif
Other DBs
NCBI-ProteinID:
UPT22754
UniProt:
A0ABY4L5L1
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All DBs
Position
4256063..4256857
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AA seq
264 aa
AA seq
DB search
MRLATWNVNSVRARSERIAAWLQRSDVDVVALQETKCRDDQFPTEVFTELGYEVAHHGLS
QWNGVAIASRVGLDDVRVGFPGQPGWGDPAEAEARALGAVCGGVRVWSLYVPNGREVDHP
HYTYKLQWLERLREAGEGWLAEDPRARIALCGDFNIAPRDDDVWDMAEFEGRTHVTKPER
DAFQALVDAGFTDVVRPYTPGPGVYTYWDYKGLSFPKRKGMRIDFVLASPALAERAAGAA
VDREERKGKGASDHAPVIVDLRPE
NT seq
795 nt
NT seq
+upstream
nt +downstream
nt
gtgcgattggcgacgtggaatgtgaacagtgtgcgggcgcgcagcgagcgcatcgccgcc
tggctgcagcggagcgacgtggacgtcgtcgccctccaggagacgaagtgccgggacgac
cagttcccgaccgaggtcttcaccgaactcggctacgaggtcgcccaccacgggctgtcg
cagtggaacggggtcgcgatcgcctcccgggtggggctggacgacgtgcgcgtcggcttc
cccggacagcccggctggggcgacccggcggaggcggaggcccgcgcgctcggcgccgtg
tgcggcggggtgcgggtgtggagcctgtacgtccccaacggccgcgaggtcgaccacccg
cactacacctacaagctgcagtggctggagcggctccgcgaggccggggagggctggctg
gccgaggacccgcgggcgcggatcgcgctgtgcggcgacttcaacatcgccccccgggac
gacgacgtgtgggacatggcggagttcgagggccgcacccacgtcaccaagcccgagcgg
gacgccttccaggcgctggtcgacgccggcttcaccgacgtggtgcggccgtacacgccc
ggacccggcgtctacacctactgggactacaagggcctgtccttccccaagcgcaagggc
atgcgcatcgacttcgtgctggcctcgcccgcgctggcggagcgggccgcgggcgcggcg
gtcgaccgcgaggagcgcaagggcaagggcgcctccgaccacgcccccgtcatcgtggac
ctgcggccggagtga
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