Thermobifida alba: FOF52_19100
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Entry
FOF52_19100 CDS
T08159
Name
(GenBank) HAMP domain-containing protein
Organism
talx
Thermobifida alba
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HAMP_2
HAMP
HATPase_c
Response_reg
GAF_2
HisKA
GAF
Laminin_II
ATG17_like
DUF5983
YscO-like
OKR_DC_1_N
Motif
Other DBs
NCBI-ProteinID:
UPT23625
LinkDB
All DBs
Position
complement(4299472..4303683)
Genome browser
AA seq
1403 aa
AA seq
DB search
MTEGELDTLLDALYKMRDGDFSVRLTPRGQGRYSEVTRVLNEVLDHCEQLSDELQRVSGT
VSADGRLSERVSISPARGAWGKSVRALNQMLDEVSEPVTSVARILDSVANGDLSQRVDLT
SRHGELHGDLLRLATSVNRMADQMSEITDEVTRVAREVGTEGKLGGRANVKGVSGIWKDL
TDNVNSMADNLTNQVRDISQVTTAVARGDLTKKVTVDVQGEMLQLKDTVNTMVDQLSAFA
DEVTRMAREVGTEGKLGGRANVKGVSGIWKDLTDNVNSMADNLTNQVRDISQVTTAVARG
DLTKKVTVDVQGEMLQLKDTVNTMVDQLSAFADEVTRMAREVGTEGKLGGRANVKGVSGI
WKDLTDNVNSMANSLTHQVRNISQVTSAVAAGDLTKKITVDAQGEMLELKDTVNTMVDQL
SAFADEVTRMAREVGTEGKLGGQAHVSGVSGVWKDLTDNVNSMANNLTHQVRQISVVTTA
VARGDLTKKVTVNAKGEILELKDTINTMVDQLDSFADEVTRVAREVGTEGKLGGRANVKG
VSGIWKDLTDNVNSMSHNLTTQVRNISQVTTAVARGDLTKKITVDAQGEMLELKDTINTM
VDQLSTFALEVTRVGHEVGSEGKLGVQAKVAGVSGVWKDLTDTVNELAKNLTTQVRAIAS
VASAVARGDLTQSIQVSARGELATLKDNVNLMVSNLRETTAAQRDEDWLKSNLARLSGLI
QGHRDLNDLARLIMTEVTPLVDAQHGACYLPEDENDTETFRLYAGYGYQPSEQRRRITAG
RGLAGEAIAQRKEMLVRDVPGDYVRVESGLGEAPPLSLAIFPILSEDRVLGVIELGSYGE
FREIHLNFLRQLVSLISATITTILANSKTEYLLAQSQQLTTALQERSNELQRQQEELRRK
NAELHSKAGQLASQNRAIELQNRQIERARRSLEDRAHQLQVSSKYKSEFLANMSHELRTP
LNSLLILARLLADNSEQNLTPKQVEFAQTIHKAGSDLLQLINEILDLSKIEAGRMELSPS
NVSISQLVDYVEASFRPMASEKGLAFAVEVSPDIPDHLWTDEQRLQQVLRNLLSNAVKFT
SSGEVRLLIEPAWALDDADLDMFADTDEVIAFSVTDTGIGIPEDKLQLIFEAFHQGDGGT
SRRFGGTGLGLSISRNMAELLGGEIRVNSVLGEGSTFTLLLPVRLPEGTTERLYHSLNGA
DVFTPFESPPAEPIALPEGAPAAAPVSEAEPPAPDEGEAPVPVFTSPAPVPSSRAEEAGR
DAPQRDEVLAGKRVLIVDDDIRNVFALASALEAHGLRVLYADNGREGIAKLEANEDIDLV
LMDIMMPELDGDATTRAIREMPQFADLPIISLTAKAMRGDRESSLEAGASDYVSKPVDLD
HLLDVMRRWLDRDDSDSDTSREQ
NT seq
4212 nt
NT seq
+upstream
nt +downstream
nt
atgaccgagggcgaactggacacgctcctcgacgcgctctacaagatgcgcgacggggat
ttcagtgtccggctcaccccccgtggccagggcaggtacagcgaggtcacccgggtgctg
aacgaggtcctggaccactgcgagcagctgagcgacgagctccagcgggtcagcgggacg
gtcagcgccgacgggcggctctccgaacgcgtctcgatcagtccggcgcgcggcgcctgg
ggcaagagcgtacgggcgctcaaccagatgctggacgaggtcagcgagccggtgacctcg
gtggcgcggatcctggactcggtggccaacggcgacctctcccagcgggtggacctgacc
agccggcacggggagctccacggcgacctgctgcgcctggccacctcggtgaaccggatg
gccgaccagatgtcggagatcaccgacgaggtgacgcgggtggcccgcgaggtcggcacc
gagggcaagctcggcggacgcgccaacgtcaagggcgtctccggcatctggaaggacctc
accgacaacgtcaactcgatggccgacaacctcaccaaccaggtgagggacatctcccag
gtcaccaccgcggtcgcgcgcggcgacctcaccaagaaggtcaccgtggacgtccagggc
gagatgctccagctcaaggacaccgtcaacacgatggtcgaccagctctccgccttcgcc
gacgaggtcacccgcatggcccgcgaggtcggcaccgagggcaagctcggcggacgcgcc
aacgtcaagggcgtctccggcatctggaaggacctcaccgacaacgtcaactcgatggcc
gacaacctcaccaaccaggtgagggacatctcccaggtcaccaccgcggtcgcgcgcggc
gacctcaccaagaaggtcaccgtggacgtccagggcgagatgctccagctcaaggacacc
gtcaacacgatggtcgaccagctctccgccttcgccgacgaggtcacccgcatggcccgc
gaagtcggcaccgagggcaaactcggcggacgcgccaacgtcaagggcgtctccggcatc
tggaaggacctcaccgacaacgtcaactcgatggcgaacagcctgacccaccaggtgcgc
aacatctcccaggtgacgtcggcggtggcggccggcgacctgacgaagaagatcaccgtg
gacgcccagggcgagatgctggagttgaaggacaccgtcaacacgatggtcgaccagctc
tccgccttcgccgacgaggtcacccgcatggcccgcgaagtcggcaccgagggcaaactc
ggcggtcaggcgcacgtgagcggggtgtcgggggtgtggaaggacctcaccgacaacgtc
aactcgatggcgaacaacctgacccaccaggtgcggcagatctccgtggtgaccacggcg
gtggcgcgcggcgacctcaccaagaaggtcacggtcaacgccaagggcgagatcctggag
ttgaaggacaccatcaacacgatggtcgaccagctggactccttcgccgacgaggtgacg
cgggtggcccgcgaggtcgggaccgagggcaagctcggcggacgcgccaacgtcaagggc
gtctccggcatctggaaggacctcaccgacaacgtcaactccatgtcgcacaacctgacc
acgcaggtgcgcaacatctcccaggtcaccaccgcggtggcgcgcggcgacctgacgaag
aagatcaccgtggacgcccagggcgagatgctggagctgaaggacaccatcaacacgatg
gtcgaccagctgtccacgttcgccctggaggtgacccgggtcggccacgaggtgggcagc
gagggcaagctcggcgtgcaggcgaaggtcgccggggtgtcgggggtgtggaaggacctc
accgacaccgtgaacgagctggccaagaacctcaccacgcaggtgcgcgcgatcgcgtcg
gtggccagcgccgtggcgcgcggcgacctgacccagtccatccaggtgagcgcgcgcggc
gagctggccacgctgaaggacaacgtcaacctgatggtgtccaacctgcgggagaccacc
gcggcgcagcgcgacgaggactggctgaagagcaacctggcgcggctgtccggcctcatc
cagggccaccgcgacctcaacgacctggcccgcctcatcatgaccgaggtgacccccctg
gtggacgcccagcacggcgcctgctacctgcccgaggacgagaacgacaccgagaccttc
cgcctctacgccgggtacgggtaccagcccagcgagcagcggcgccgcatcaccgcgggc
cggggcctggccggggaggcgatcgcgcagcgcaaggagatgctcgtccgcgacgttccc
ggcgactacgtgcgggtcgagtcggggctgggcgaggcgccgccgctgagcctcgcgatc
ttcccgatcctgtcggaggaccgggtgctcggcgtgatcgagctgggctcctacggcgag
ttccgggagatccacctcaacttcctgcggcagctcgtcagcctcatcagcgcgacgatc
accacgatcctggccaactccaagaccgagtacctgctggcccagtcccagcagctgacc
accgcactgcaggagcgctccaacgagctgcagcgccagcaggaggagctgcgccgcaag
aacgccgagctgcacagcaaggcgggccagctggccagccagaaccgcgccatcgagctg
cagaaccggcagatcgagcgggcccggcggtccctggaggaccgggcgcaccagctccag
gtgtcctccaagtacaagtcggagttcctcgcgaacatgtcgcacgagctgcgcaccccg
ctcaacagcctgctgatcctggcccggctgctggccgacaacagcgagcagaacctcacc
cccaagcaggtggagttcgcgcagaccatccacaaggcgggaagcgacctgctgcagctc
atcaacgagatcctggacctgtccaagatcgaggcggggcgcatggagctgagcccgagc
aacgtgtccatcagccagctggtggactacgtggaggcgtcgttccggccgatggccagc
gagaaggggctggcgttcgccgtggaggtgtccccggacatcccggaccacctgtggacc
gacgagcagcggctccagcaggtgctgcgcaacctgctgtccaacgcggtgaagttcacc
agcagcggcgaggtgcggctgctgatcgaaccggcgtgggcgctggacgacgccgacctg
gacatgttcgccgacaccgacgaggtcatcgcgttctcggtgaccgacaccggcatcggc
atccccgaggacaagctccagttgatcttcgaggcgttccaccagggcgacggcgggacc
agccgccggttcggcgggaccggcctgggcctgtccatcagccgcaacatggccgaactg
ctcggcggggagatccgggtgaacagcgtgctgggggagggcagcacgttcacgctgctg
ctgccggtgcggctgcccgagggcaccaccgagcggctgtaccactcgttgaacggcgcc
gacgtgttcaccccgttcgagtcgccgcccgccgagccgatcgcgctgcccgagggggcg
cccgcggcggccccggtctccgaggccgaacctccggccccggacgagggcgaggcgccg
gtgccggtgttcacctcgcccgcgccggtcccgtcgtcgcgggccgaggaggcggggcgg
gacgccccgcagcgggacgaggtgctggcgggcaagcgggtgctcatcgtcgacgacgac
atccgcaacgtcttcgcgctcgccagcgccctggaggcgcacgggctgcgggtgctctac
gccgacaacggccgcgaggggatcgcgaagctggaggcgaacgaggacatcgacctcgtg
ctgatggacatcatgatgccggagttggacggcgacgcgaccacccgcgccatccgggag
atgccgcagttcgcggacctgccgatcatctcgctcaccgccaaggccatgcggggcgac
cgggagagcagtctggaggcgggcgcctccgactacgtgagcaaaccggtggatctcgac
cacctgctggatgtcatgcggcggtggttggatcgcgacgacagcgacagcgacacgagc
cgggagcagtga
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