Thermobifida alba: FOF52_21270
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Entry
FOF52_21270 CDS
T08159
Symbol
ffh
Name
(GenBank) signal recognition particle protein
KO
K03106
signal recognition particle subunit SRP54 [EC:
3.6.5.4
]
Organism
talx
Thermobifida alba
Pathway
talx02024
Quorum sensing
talx03060
Protein export
talx03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
talx00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
FOF52_21270 (ffh)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
FOF52_21270 (ffh)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
FOF52_21270 (ffh)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
talx02044
]
FOF52_21270 (ffh)
Enzymes [BR:
talx01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.4 signal-recognition-particle GTPase
FOF52_21270 (ffh)
Secretion system [BR:
talx02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
FOF52_21270 (ffh)
Eukaryotic Sec-SRP protein
FOF52_21270 (ffh)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRP54
SRP_SPB
SRP54_N
AAA_22
CbiA
nSTAND3
Zeta_toxin
MMR_HSR1
ArsA_ATPase
AAA_16
APS_kinase
cobW
AAA_18
AAA_33
NACHT
AAA_30
AAA_31
AAA_25
AAA
6PF2K
AAA_24
AAA_17
ABC_tran
TsaE
AAA_5
MobB
YebG
NPHP3_N
BscB_a-b
Motif
Other DBs
NCBI-ProteinID:
UPT23157
LinkDB
All DBs
Position
4784232..4785830
Genome browser
AA seq
532 aa
AA seq
DB search
MFETLSDRLTTVFSSLRGKGRLSEEDINATAREIRLALLEADVALPVVREFIARIKERAR
GTEVSKALNPAQQVVKIVNEELIEVLGGETRTIRFAKNPPTVIMLAGLQGSGKTTLAGKL
ARWLADQRNTPLLVAADLQRPNAVTQLQVLGERAKVAVYAPEPGNGVGDPVEVARSSIDY
ARNNNHNVVIIDTAGRLGVDEEMMRQAADIRDAVSPDEILFVVDAMIGQDAVNTAQAFLD
GVGYDAVALTKLDGDARGGAALSIRHITGRPIMFASSGEKLEDFDLFHPDRMASRILDMG
DVLTLIEQAQRTFEEAEVEKMASTLASDEDFTLDDFLEQMTMIRRLGPIGKLLQMMPGMG
QMREQIENIDERELDRTAAIIRSMTPAERANPKIINGSRRLRIANGSGTQVSEVSGLVTR
FFEAQKMLRQLKQGGGLPGMPGMPGMPGVGGGRKKAAKAGKKGKKNRQRSGNPMKARQQE
AERAAQRERKRTEQPADTGLPPGFGGGAPQLPPGFGGGKIPDLSNFKLPKNK
NT seq
1599 nt
NT seq
+upstream
nt +downstream
nt
gtgttcgagacgctttccgaccgcctgaccacggtcttctcctcgctgcgcggcaaaggc
cgtctctccgaggaggacatcaacgcgaccgcgcgcgagatccgtctcgccctgctggag
gccgatgtcgcgctgcccgtcgtccgcgagttcatcgcgcggatcaaggagcgggcgcgc
ggtacggaggtctccaaggcgctgaacccggcccagcaggtcgtcaagatcgtcaacgag
gagctcatcgaggtcctggggggcgagacccgcacgatccggttcgccaagaacccgccg
acggtcatcatgctggcgggtctgcagggttcgggtaagacgaccctggcgggcaagctc
gcccggtggctcgccgaccagcgcaacactccgctgctggtcgcggccgacctgcagcgg
cccaacgcggtcacccagctccaggtcctgggggagcgggcgaaggtcgcggtgtacgcg
cccgagccgggcaacggagtcggcgacccggtcgaggtggcgcgctcctccatcgactac
gcacggaacaacaaccacaacgtcgtcatcatcgacaccgcgggccggctgggcgtcgac
gaggagatgatgcggcaggcggccgacatccgcgacgcggtctcccccgacgagatcctc
ttcgtcgtcgacgcgatgatcggtcaggacgcggtcaacacggcgcaggcgttcctggac
ggcgtcggctacgacgcggtcgcgctgaccaagctggacggcgacgcccggggtggcgcc
gcactgtcgatccggcacatcaccggccggcccatcatgttcgcctccagcggcgagaag
cttgaggacttcgacctcttccaccccgaccgcatggcctcgcgcattctcgacatgggt
gacgtgctcaccctgatcgagcaggcgcagcgcaccttcgaggaagccgaagtcgagaag
atggccagcacgctggcctccgacgaggacttcacgctcgacgacttccttgagcagatg
acgatgatccgcaggctcgggcccatcgggaagctgctgcagatgatgcccggcatgggg
cagatgcgggagcagatcgagaacatcgacgaacgcgagctggaccgcaccgcggccatc
atccggtcgatgaccccggccgagcgggccaatcccaagatcatcaacgggtcccgccgg
ctgcgcatcgccaacggctcgggaacccaggtcagcgaggtcagcggactggtcacccgg
ttcttcgaggcgcagaagatgctccgccagctgaagcagggcggcggcctccccgggatg
ccgggaatgcccggcatgccgggtgtgggcggcggtcggaagaaggcggccaaggccggg
aagaagggcaagaagaaccggcagcgcagcggcaaccccatgaaggcccgccagcaggag
gccgagcgcgccgcacagcgcgagcgcaagcgcaccgagcagcccgcggacaccgggctg
cccccgggcttcggcggcggggcgccgcagctgccgcccggcttcggcggcgggaagatc
ccggacctgtccaacttcaaactgcccaagaacaagtga
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