Tardiphaga alba: RPMA_00665
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Entry
RPMA_00665 CDS
T09683
Name
(GenBank) DNA topoisomerase IB
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
talz
Tardiphaga alba
Brite
KEGG Orthology (KO) [BR:
talz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
talz03032
]
RPMA_00665
03400 DNA repair and recombination proteins [BR:
talz03400
]
RPMA_00665
Enzymes [BR:
talz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
RPMA_00665
DNA replication proteins [BR:
talz03032
]
Prokaryotic type
DNA Topoisomerases
RPMA_00665
DNA repair and recombination proteins [BR:
talz03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
RPMA_00665
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
Motif
Other DBs
NCBI-ProteinID:
QUS42190
LinkDB
All DBs
Position
complement(138056..139192)
Genome browser
AA seq
378 aa
AA seq
DB search
MMEQQNFTATRGATPRSALSAAKLLAGKLADQQPKLRGKSTVKALARELGLTLGDQSELT
IRRRKSGKAYSFIRENGTRIRHAGTIRRLNAMAVPPAYVDVRYAVDPNLHLQAVGRDAAG
RLQYRYHADWEKVREHRKANRLARLVNALPKIRRSVSHYLAGDEPTREFALAAVIELVTR
TAIRAGNESYMKLSGTRGATTLMKSNVQIDGKCVVLSFKAKGGKAVRKECDATKLVRAIG
ILHEVKGRRLFQYYDKVGRIHKVNTAAVNAFLRDIAGIKISLKDFRTLMASATVVETLAH
IEPAESVRGRKKQVLEAVRSAADELSNTPTICRKSYVHDTIVTAFESGALARIAAKQSGY
RSQSKREQLLAHVVAEAG
NT seq
1137 nt
NT seq
+upstream
nt +downstream
nt
atgatggagcagcagaatttcacagcgacccgcggtgcgacaccgcgttcggccttgtcg
gcggccaagttgcttgccggtaagctggccgaccagcagccgaaactccgcggcaaaagc
acggtcaaagccctggcgcgtgaactcggccttaccctcggcgatcagtcggaattgacc
atccgccgccgcaagagcggcaaggcttattccttcatccgcgaaaacggcacgcgcatc
cgccatgccggcaccatccgccggttgaacgccatggcggtgccgcctgcttatgtggat
gtgcgctacgccgtggatcccaacctgcatctgcaggccgtcggtcgcgatgccgccggg
cgcctgcaatatcgctatcacgccgattgggagaaggtgcgcgagcatcgcaaggccaac
cggctggcgcggctcgtgaatgccctgccgaagatccgtcgcagcgtgtcgcactatctc
gccggcgacgagccgacgcgcgaatttgcgctggcggccgtgatcgaactggttacccgc
actgcgatccgtgccggcaatgagagctatatgaagctttccggcacccgcggcgctacc
acattgatgaagtcgaatgtgcagatcgacggaaaatgcgtcgtgctgtccttcaaggcc
aagggcggcaaggccgtgcgcaaggaatgcgacgcgaccaaactcgtgcgggctatcggt
atcctgcacgaagtgaagggccgtcggctgttccagtattacgacaaggtcggccgcatc
cataaagtgaacacggccgcggtgaacgcctttttgcgcgatatcgccgggatcaagatc
tcactgaaggattttcgcaccttgatggcatcggccacggtggtcgaaaccctggcgcat
atcgagccggccgaatcggtgcgaggtcgcaagaagcaggtgctggaggccgtacggtcc
gctgcggacgaactgtccaacacgcccaccatctgccgcaaaagctatgtccacgacacc
atcgtcaccgcgtttgaaagtggcgcactggcgcggatcgctgccaagcagagcggctac
cgttcgcaatccaagcgcgaacaattgctggcgcacgtggtggctgaagccggatag
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