Tardiphaga alba: RPMA_01420
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Entry
RPMA_01420 CDS
T09683
Symbol
rpoN
Name
(GenBank) RNA polymerase sigma-54 factor
KO
K03092
RNA polymerase sigma-54 factor
Organism
talz
Tardiphaga alba
Pathway
talz02020
Two-component system
talz02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
talz00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
RPMA_01420 (rpoN)
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
RPMA_01420 (rpoN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
talz03021
]
RPMA_01420 (rpoN)
Transcription machinery [BR:
talz03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
RPMA_01420 (rpoN)
BRITE hierarchy
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
Sigma54_AID
Arg_repressor
HTH_IclR
Motif
Other DBs
NCBI-ProteinID:
QUS37671
LinkDB
All DBs
Position
289881..291536
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AA seq
551 aa
AA seq
DB search
MALTQRLEFRQTQSLVMTPQLMQAIKLLQLSNLDLSTFVEEELERNPLLDRASDGPEPPV
AGEQSAERTEYERSDDYGSSSETGDASDFADRGGESRFDAPAPEDWINNDLGSRADIEQT
FDTGLDNVFSEEPAEAAARNAQDAAPTAYTEWGGGASNDDDYNLEAFVAAEVTLGDHLAE
QLAVAFTAPAHRMIGQYLIDLVDEAGYLPADLGDVGDKLGASADEVAVVLGTLQTFDPPG
VCARNLSECLAIQLREQNRYDPAMQALVENLDLLAKRDVVSLRKICGVDDEDLTDMIGEI
RRLDPKPGQKFGASRAQTVVPDVYVRPGPDGGWHVELNSDTLPRVLVNQTYYSQLSKTIR
KDGDKSYFSDCLQNATWLVRALDQRARTILKVSTEIVRQQDGFFTQGVAHLRPLNLKAVA
DAIQMHESTVSRVTANKYMATNRGIFELKYFFTASIASADGGEAHSAEAVRHHIKQLIDN
ESPSQILSDDTIVERLREAGIDIARRTVAKYREAMRIPSSVQRRRDKQSMLGNALKASSN
PSDKSRDTAPA
NT seq
1656 nt
NT seq
+upstream
nt +downstream
nt
atggcgctgacgcagagactcgaatttcggcagacccagtcgctggtgatgacgccgcag
ctgatgcaggcgatcaagcttctgcagctgtcgaatctcgatttatcgacctttgtcgag
gaagagctggagcgtaatccgctgctagaccgcgccagcgacgggccggaaccgccggtg
gccggcgagcagagcgccgagcgcaccgaatacgaacgttccgacgactacggctcatct
tccgagactggcgacgcgtccgatttcgccgatcgcggaggcgaaagccgcttcgatgcg
ccggctcccgaagactggatcaacaacgatctcggctcgcgcgccgatatcgaacagacc
ttcgacaccggtctcgacaatgtgttctcggaagagcctgcagaagctgctgcacgcaac
gcgcaggatgcagcgccgaccgcttacacagagtggggcggtggcgcgtccaatgacgac
gactacaatctcgaagcattcgtcgccgcagaagtgacgctcggcgatcaccttgccgag
cagcttgccgttgccttcaccgcgccagcgcatcgcatgatcggtcagtacctgatcgat
ctcgtcgatgaagccggttatctgccggccgatctcggcgatgtcggcgacaagctcggc
gcatccgccgacgaagttgccgtggtgctcggtaccctgcagacattcgatccgccgggc
gtatgcgcgcgcaatctaagtgagtgtctggcgatccagctgcgcgaacagaatcgttac
gatcctgcgatgcaggcgctggtcgagaatctcgatctgcttgcgaagcgcgacgtggtc
agcctgcgcaagatctgcggcgtcgatgatgaagacctcaccgacatgatcggtgaaatc
cgaagactcgatccgaagcccggtcagaaattcggcgcgtcgcgtgcacagaccgtggtg
ccggatgtctatgtgcggccggggcctgacggtggctggcatgtcgagctcaacagcgac
acactgccgcgcgttctcgtgaaccagacctattattcccaactgtcgaaaaccatccgc
aaggatggcgacaagtcgtatttttccgattgcctgcagaatgcgacatggctcgtccgt
gcgctggatcaacgcgcgcgtaccattctcaaagtatcaacggaaatcgtccgtcagcag
gacggcttcttcactcagggcgtagcgcatctgcgtcccctgaacctgaaggctgttgcc
gacgcgatccagatgcatgaatcaacggtgtcgcgcgtcaccgccaataaatacatggcg
accaatcgcggcatttttgaattgaaatacttctttaccgcgtcgatcgcgtcggccgat
ggcggcgaagcgcattcggcagaggccgtgcggcatcacatcaagcagttgattgataac
gagagcccctctcagatactttctgacgatacgatcgtggaacgtttgcgcgaagcgggc
attgatattgcccgtcgtaccgtggcgaaataccgcgaagctatgcggattccgtcgtcg
gtgcagcgccgtcgcgacaagcagagcatgctcggaaatgctctcaaggcgtcgtcaaat
ccatccgacaaatcccgcgacactgcaccagcttga
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