Tardiphaga alba: RPMA_06425
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Entry
RPMA_06425 CDS
T09683
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K10943
two-component system, response regulator FlrC
Organism
talz
Tardiphaga alba
Pathway
talz02020
Two-component system
talz02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
talz00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
RPMA_06425
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
RPMA_06425
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
talz02022
]
RPMA_06425
02035 Bacterial motility proteins [BR:
talz02035
]
RPMA_06425
Two-component system [BR:
talz02022
]
Other families
FlrB-FlrC (polar flagellar synthesis)
RPMA_06425
Bacterial motility proteins [BR:
talz02035
]
Flagellar system
Flagellar assembly proteins
Others
RPMA_06425
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
HTH_8
AAA_5
Response_reg
AAA_16
AAA_3
AAA
AAA_2
AAA_19
MCM
Mg_chelatase
AAA_22
HTH_Tnp_ISL3
AAA_7
nSTAND3
AAA_18
HTH_30
AAA_PrkA
TIP49
HTH_50
Motif
Other DBs
NCBI-ProteinID:
QUS38508
LinkDB
All DBs
Position
complement(1361085..1362470)
Genome browser
AA seq
461 aa
AA seq
DB search
MRLLIVGTLKGQLTTATKIAMDNGASVVHAEGLDQAMNVLRSGKGADLLLVDVALDIRDL
VMRLEAEHIHVPIVACGITSDARAAVAAIHAGAKEYIPLPPDPELIAAVLGAVANDARDL
IYRDEMMGKVVKLAQQIAGSDASVMITGESGTGKEVLARYVHNRSNRSKKPFISINCAAI
PEHLLESELFGHEKGAFTGAIARRIGKFEEATGGTLLLDEISEMDVRLQSKLLRAIQERV
IDRVGGTKPVPVDIRIIATSNRNLSDAVKAGTFREDLLFRLNVVNLKIPALRDRPADILE
LAQHFAKKYAEANGVPVRPLSADARRVLTGNRWQGNVRELENTIHRSVLMSSGDEIGADA
ILTPDGDRLDLAKTSPAVAHATMAAETVTRALVGRTVADVERDLILETLKHCLGNRTHAA
NILGISIRTLRNKLNEYADGGLPITPAGAGSGDYRGMMGAA
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
atgcggcttctcatcgtcggcaccctgaaagggcagctcacaacggcgaccaagatcgcc
atggataacggcgcctcggtggtgcacgccgaaggcctcgaccaggccatgaacgtgctg
cgatcgggcaagggcgcagaccttctgctggtcgacgtcgcgctcgacatccgcgacctc
gtgatgcggctcgaggccgagcacatccacgtgcccatcgtggcctgcggcatcaccagc
gatgctcgcgccgccgtggccgcgatccatgccggcgcgaaagaatacatcccgctgccg
cccgatccggaactgatcgccgccgtgctcggcgccgtcgccaatgacgcgcgcgacctg
atctatcgcgacgagatgatgggcaaggtggtgaagctggcgcaacagatcgccggctcc
gacgcctcggtgatgatcaccggcgaaagcggcaccggcaaggaagtgctggcgcgctat
gtgcacaaccgttcgaaccgatcgaagaagccgttcatctcgatcaactgcgcggccatt
cccgaacatctcctggagtccgaactgttcggccacgagaagggtgccttcaccggcgcc
atcgcgcgccgcatcggcaaattcgaggaagccaccggcggcacgctgctgctggacgaa
atctcggaaatggatgtgcgactgcagtcgaagttgctgcgcgccattcaggaacgtgtg
atcgaccgtgtcggcggcaccaagcccgtgccggtggatatccgcatcatcgccacgtcg
aaccgcaacctgtcggatgcggtgaaggcgggcacgttccgcgaggacttgctgttccgt
ctcaacgtcgtcaacctgaagatcccggcgctgcgcgatcgtcctgccgatattctcgaa
ctcgcgcagcatttcgccaagaaatatgccgaagccaatggcgtgccggtgcgtccgctc
tcggcggacgcacgccgcgtcctcaccggcaatcgctggcagggcaatgtgcgcgagctc
gaaaacaccatccaccgttcggtgctgatgtcctcgggcgacgagatcggtgctgatgcg
atcctgacgcccgatggcgatcgtctcgaccttgccaagacctcgccggccgtggctcat
gcgaccatggccgccgagacggtgacgcgcgcgctggtcggccgcacggtggcggatgtg
gaacgcgacctgatcctggagacgctgaagcactgcctcggcaaccgcacccacgcggcg
aacattctcggcatctcgatccgcacattgcgcaacaagctgaacgaatatgcggatggc
ggcctgccgatcacaccagccggtgcgggttcaggcgattatcgcgggatgatgggcgcg
gcctaa
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