Tardiphaga alba: RPMA_09275
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Entry
RPMA_09275 CDS
T09683
Name
(GenBank) AAA family ATPase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
talz
Tardiphaga alba
Pathway
talz03420
Nucleotide excision repair
talz03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
talz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
RPMA_09275
03430 Mismatch repair
RPMA_09275
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
talz03400
]
RPMA_09275
Enzymes [BR:
talz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
RPMA_09275
DNA repair and recombination proteins [BR:
talz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
RPMA_09275
MMR (mismatch excision repair)
Other MMR factors
RPMA_09275
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
AAA_30
UvrD_C_2
PcrA_UvrD_tudor
AAA_11
DUF3553
Motif
Other DBs
NCBI-ProteinID:
QUS38998
LinkDB
All DBs
Position
complement(1980821..1983259)
Genome browser
AA seq
812 aa
AA seq
DB search
MTEARKMPANDLPAYQPVAGGIAARARAAAAPAPYLDNLNPEQRDAVETLDGPVLVLAGA
GTGKTKVLTSRIAHILSTGRARPGEILSVTFTNKAAREMKHRLGIMLGQAVEGMPWLGTF
HSIGGRILRSHAELVQLKSNFTVLDTDDQIRLLKQLLSAENIDDKRWPARMLAGLIDGWK
NRGLTPAQVPAGEAAVFGNGKGGKLYKDYQERLKTLNAADFGDLLLECIRLFREHPDVLR
SYQARFKFILVDEYQDTNVAQYLWLRLLSQGAARAPSPGEDNAIATQTAATRNICCVGDD
DQSIYGWRGAEVDNILRFEHDFPGAKVIRLERNYRSTGHILAAASHLIAHNEGRLGKTLR
TEDVDGEKVTVTGAWDSEEEARGVGEEIEQLQREGHKLNDIAILVRASFQMREFEDRFVT
LGLPYRVIGGPRFYERAEIRDALAYLRVINSPADDLAFERIVNVPKRGLGDATVQMLHDH
ARRRRIPLSEAARQVIETDEMKPKARGSLRDLMLSFERWRKQMEVVSHTELAEVVLDESG
YTEMWQKDRSADAAGRLENLKELVRSMEEFENLQGFLEHISLVMDREGAADEDAVSVMTL
HSAKGLEFDNVFLPGWEEGLFPHQRALDEQGRAGLEEERRLAHVGITRARKRAKLYFATN
RRIHGTWNTTIPSRFLDELPAANVEITESKGGNGWGGAGGYGSSRFDNLEAFGSTYSTPG
WQRAQQQRGRSGGGYGDSFGGNSGGAKKRPMVIEGELVAKSTGTDSAFSLDDRVFHEKFG
YGHVTKIDGNKLTIDFDKAGEKKVVDSFVRAA
NT seq
2439 nt
NT seq
+upstream
nt +downstream
nt
atgaccgaagcacgcaaaatgcccgccaacgaccttcccgcctatcagcccgtggcgggc
ggcattgctgcgcgcgcccgagcggccgccgcacccgcgccctatctcgacaatctcaat
cccgagcagcgcgacgccgtcgagacgctggacggccccgttctggtgctcgccggcgcc
ggcaccggcaagaccaaggtgctgacctcgcgcatcgcgcatattctctccaccggccgt
gcacggcccggcgagatcctgtcggtgaccttcaccaacaaggccgcgcgcgagatgaag
catcgtctcggcatcatgctcggccaggccgtcgaaggcatgccgtggctcggcaccttc
cactccatcggcggccgcatcctgcgcagccatgcggagctggtgcagctcaagtcgaac
ttcacggtgctcgacaccgatgaccagatccgcctgctcaagcaacttttgtcggcggag
aatatcgacgacaagcgctggccggcgcgcatgctggccgggctgatcgatggctggaag
aatcgcggcctcacgcctgcgcaggtgccggcgggcgaagccgcggtgttcggcaatggc
aagggcggcaagctctacaaggactatcaggagcggctgaagacgctgaacgcggcggac
ttcggcgatctgctgctagaatgcatccgcctgttccgcgaacatccggatgtgctgcga
tcgtatcaggcgcggttcaagttcatcctggtggacgagtatcaggacacgaatgtcgcg
cagtatctgtggctgcggctgctgtcgcagggcgccgcgcgtgcgccttcaccgggcgag
gacaatgccatcgccacgcaaaccgccgccacgcgaaacatctgctgcgtcggcgatgac
gaccagtcgatctatggctggcgcggcgccgaggtcgataacatcctgcgcttcgaacac
gatttccccggcgccaaggtgatccggctggagcgcaattatcgttcgacaggtcacatc
cttgccgctgcctcgcatctgatcgcgcacaatgaaggccggctcggcaagacgctgcgc
accgaagatgtcgacggcgaaaaggtcaccgtcaccggcgcatgggactccgaggaggaa
gcccgcggcgtcggcgaggagatagagcagctgcagcgcgagggccacaagctcaacgat
atcgccattctcgtgcgtgcctcgttccagatgcgcgaattcgaagaccgcttcgtcacc
ctcggcctgccctatcgcgtcatcggcggcccgcgtttctatgagcgtgcggaaatccgc
gatgcgctggcttacctgcgcgtgatcaattcaccggccgacgatctcgctttcgaacgc
atcgtcaatgtgccgaagcgcggcctcggcgatgccaccgtgcagatgctccatgaccat
gcacgccgccgccgcatcccgctctcggaagcagcgcgacaagtgatcgagaccgacgag
atgaagccgaaggcgcgcggttcgctgcgcgacctgatgctgagcttcgagcgctggcgc
aagcagatggaagtcgtctcgcatacggagctggcggaggtcgtgctcgacgagagcggc
tataccgagatgtggcagaaggatcgctcggccgacgccgccggccggctggaaaacctc
aaggagctggtgcgctccatggaggaattcgagaatctgcaaggcttcctcgaacacatc
tcgctggtgatggatcgcgaaggcgcagccgacgaggatgcggtgtctgtgatgacgctg
cattcggccaaggggctggaattcgacaatgtgtttctgcccggctgggaggaaggcctg
tttccgcatcagcgcgcgctcgacgagcagggccgcgcagggctggaagaagagcgccgc
ctcgcccatgtgggcatcacgcgtgcccgcaagcgcgcaaaactttacttcgccaccaat
cgccgcattcacggcacctggaacacgacgatcccgtcgcgcttcctcgacgaactgccg
gcggcgaatgtggagatcacggaatccaagggcggcaacggctggggcggcgccggcggc
tatggttcgtcgcgcttcgacaatctcgaagcttttggctcgacctattcgaccccaggc
tggcagcgcgcgcaacagcagcgcgggcgcagcggtggtgggtatggtgacagttttggc
ggaaatagtggcggcgcgaaaaagcgaccgatggtcatcgaaggcgagctggtggcaaaa
tccaccggcaccgattcagccttctcgctcgatgatcgcgtcttccacgaaaaattcggc
tacggccatgtcaccaagatcgatggcaacaagctcaccatcgatttcgacaaggccggc
gagaagaaggtcgtcgatagtttcgtgagggcagcctga
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