Tardiphaga alba: RPMA_10060
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Entry
RPMA_10060 CDS
T09683
Name
(GenBank) long-chain fatty acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
talz
Tardiphaga alba
Pathway
talz00061
Fatty acid biosynthesis
talz00071
Fatty acid degradation
talz01100
Metabolic pathways
talz01212
Fatty acid metabolism
talz02024
Quorum sensing
talz04146
Peroxisome
Module
talz_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
talz00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
RPMA_10060
00071 Fatty acid degradation
RPMA_10060
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
RPMA_10060
09145 Cellular community - prokaryotes
02024 Quorum sensing
RPMA_10060
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
talz01004
]
RPMA_10060
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
talz04147
]
RPMA_10060
Enzymes [BR:
talz01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
RPMA_10060
Lipid biosynthesis proteins [BR:
talz01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
RPMA_10060
Exosome [BR:
talz04147
]
Exosomal proteins
Exosomal proteins of breast milk
RPMA_10060
Exosomal proteins of breast cancer cells
RPMA_10060
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
DUF764
Motif
Other DBs
NCBI-ProteinID:
QUS39145
LinkDB
All DBs
Position
complement(2136195..2138126)
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AA seq
643 aa
AA seq
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MMDYAGRVKQADTYPKLLRLNAKEHGSEIALREKDFGLWREFTWNDYHARVRDFTIGMLE
LGIGKGDVIGIIGDNRPDWVAAEIAAHAIGGMSLGLYRDVLDEEAAYLLNYGEAKIVFAE
DEEQVDKLLGLADRVPALQHIIYSDPRGMRKYDDPRLMGADRLAQMGRNRLSHEPHIYDE
LVDATRGEDVAILCTTSGTTSNPKLAMLAAGRVLGHCAVYLSFDPKGPDDEYVSVLPLPW
IMEQVYALGKGLLSRMKVNFVEQQDTLMNDFREIAPTFVLFAPRVWEGIAADVRARVMDA
SPLKQSLYELGMKTGLNALADGKRSVVADALLFRALRDRLGFTRLRSAATGGAALGPDTF
KFFRAMGVPLRTLYGQTETLGAFTLHAPDAVDPDTTGIAMGDNIAIEVRDPDSQGVGEIV
VKHPNMFLGYYKNEEASAADMRDGWMYSGDAGYFNDDKQLVVIDRIKDLAETARGERFSP
QYIENKLKFSPYVAETVVLGAGRDALAAMICIRYSIISKWAEKNRLSFTTYTDLSSRPEV
YALLQKEVEAVNATLPPAQRISRFLLLYKELDADDGELTRTRKVRRNVINEKYADIIDGI
YGGQSDIPVDTTIRFQDGTSQRIRTRLKVVNMTHDVAPSQAAE
NT seq
1932 nt
NT seq
+upstream
nt +downstream
nt
atgatggattacgccggacgcgtcaaacaggccgacacctatccgaagctgcttcgcctc
aacgcgaaggagcacggcagtgagatcgcgctgcgcgaaaaggatttcgggctctggcgc
gaattcacctggaacgactatcacgcgcgcgtgcgtgatttcacgatcggcatgcttgaa
ctcggcatcggcaagggcgacgtcatcggcatcatcggtgacaaccggccggactgggtc
gctgccgagatcgccgcccatgcgatcgggggcatgagtctcggtctctatcgcgatgtg
ctggacgaggaagccgcctatctcctcaattacggcgaagcgaagatcgtatttgctgag
gacgaggaacaggtcgacaagctactcggcctcgccgatcgtgtccctgctctgcagcac
atcatctacagcgatccgcgtggcatgcggaaatacgatgatccccgcctgatgggagcc
gatcggctcgcgcagatgggccgcaatcgtctctcgcacgagccacatatttacgatgaa
ctcgtggatgcgacccgcggcgaggatgtcgcgatcctctgcacgacctcgggcaccaca
tcgaacccgaaactcgccatgctggccgccggccgcgtgctcggccattgcgccgtctat
ctgtcgttcgatccgaagggcccggatgacgagtatgtctcggttctgccgctgccctgg
atcatggaacaggtctacgcgctcggcaaaggcctgctgtcgcggatgaaggtcaacttc
gttgagcagcaggacacgctgatgaacgatttccgcgagatcgcgccaaccttcgttctg
ttcgcgccccgcgtctgggaaggcatcgccgccgacgtccgcgcgcgggtgatggatgcc
tcgccgctgaagcagagcctgtatgagctcggcatgaagaccgggctcaatgccctcgca
gatggcaagcgctccgtcgtcgccgatgccctgctgttccgcgcgctgcgcgaccgtctc
ggcttcacccgcctgcgttcggcggccaccggcggcgccgcgctggggccggatacgttc
aagttcttccgcgccatgggcgtgccgctgcgcacgctgtacggtcagaccgaaacgctc
ggcgccttcacgctgcatgcgccggatgccgttgaccccgacaccacgggcattgcgatg
ggcgacaatatcgccatcgaggtccgcgaccccgacagccagggcgtcggcgagatcgtg
gtgaagcacccgaacatgttcctcggctactacaaaaacgaggaagcctccgccgccgat
atgcgcgacggctggatgtattccggcgatgccggctatttcaacgacgacaagcagctc
gtggtcatcgaccgcatcaaggatctcgccgagaccgcccgcggcgagcgcttctcgccg
caatatatcgagaacaagctgaaattttcgccctatgtggcggagactgtcgtgctcggt
gccggccgcgatgcgctcgcggcgatgatctgcattcgctattcgatcatttcgaaatgg
gcggagaagaaccggctgtccttcacgacctataccgacctatcctcgcgccctgaggtc
tatgcgctcttgcagaaagaggtcgaggccgtcaatgccacgctgccgccggcgcagcgc
atatcgcgcttcctgcttctgtacaaggaactcgatgcagatgacggtgagctcacgcgc
acgcgaaaagtccgccgcaacgtcatcaacgagaaatatgccgacatcatcgacggcatc
tatggcggacagagcgacattccggtcgataccaccatccgtttccaggacggcacatcg
cagcgcatccgcacgaggttgaaggtggtgaacatgacgcacgacgttgccccttcccaa
gctgccgagtga
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