Tardiphaga alba: RPMA_13510
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Entry
RPMA_13510 CDS
T09683
Symbol
rnd
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
talz
Tardiphaga alba
Brite
KEGG Orthology (KO) [BR:
talz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
talz03016
]
RPMA_13510 (rnd)
Enzymes [BR:
talz01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
RPMA_13510 (rnd)
Transfer RNA biogenesis [BR:
talz03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
RPMA_13510 (rnd)
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Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
HRDC
Motif
Other DBs
NCBI-ProteinID:
QUS39743
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All DBs
Position
complement(2859604..2860752)
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AA seq
382 aa
AA seq
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MELITTTDQLAAACERLAQHPVITVDTEFLRETTYYPLLCVVQMASADDAVVVDTLAEGI
DLAPFFALMNNEAVLKVFHAARQDIEIMVHRNGVVPHPIFDTQVAAMVLGYGDSIAYDQL
VERVTGHRPDKTHRFTDWSRRPLTEEQLHYAVSDVTHLRDVFAKLDADLKKRNRSDWVSE
EMKILTSPKTYDFHPERAWERLKTRVRKPKELAVLMEVAAWREQEAQSRDVPRSRVLKDD
AVGDIATHAPTSLEKLANLRSLPKGFERSKWGSDILAAIRRGIDRDPNTLPKLEKPRGNG
NGAATVELLKVLLRMTSERHAVASKVIATVDDLEQIAINDNADVGALQGWRHELFGKDAL
ALKHGRLALAMEKGRVIRVERS
NT seq
1149 nt
NT seq
+upstream
nt +downstream
nt
atggaactgatcaccaccaccgaccaactcgccgccgcctgtgagcgcctcgcccagcat
ccggtcatcaccgtcgatacggaattcctccgcgagaccacctactatcccctgctctgc
gtcgtgcagatggccagcgcggatgatgccgtggtcgttgacaccctcgccgaaggcatc
gatctcgcgccgttcttcgcgctgatgaacaacgaagccgtgctgaaggtcttccatgcc
gcgcggcaggacatcgagatcatggtccaccgcaatggcgtggtgccgcatccgatcttc
gatacacaggtcgcggccatggtcctcggctatggcgacagcatcgcctatgaccagctc
gtcgagcgcgtcaccggccatcgcccggacaagacacatcgcttcaccgactggtcgcgc
cgtccgctgaccgaagagcagttgcactacgccgtctcggacgtgacccatctgcgcgat
gtgttcgccaagctcgatgcggatctgaagaagcgcaatcgcagcgactgggtgagcgag
gagatgaagatcctcacctcgccgaagacctatgacttccatcccgagcgcgcctgggag
cgtctcaagacccgcgtccgcaagccgaaggagctggcggtgctgatggaagtggccgcc
tggcgcgagcaggaagcgcagagccgcgatgtgccgcggtcgcgcgtcctcaaggacgat
gctgtcggcgatatcgccacccacgcgccgacctcgctggagaagctcgcaaacctgcgc
tcgctgccgaaaggctttgaacgttcgaagtggggcagcgatatccttgccgccatccgg
cgcggcatcgatcgcgatcccaacactctgccgaagctggaaaagccgcgcggcaatgga
aatggcgcagccacagtcgagctattgaaagttctgctgcgcatgacctccgagcgtcac
gccgtcgccagtaaggtgatcgccaccgtggacgatctcgaacagatcgccatcaacgac
aatgccgatgtcggcgcgctacagggctggcggcatgagctgttcggcaaggacgcgctc
gcgctgaagcatggtcgtcttgctctggcgatggaaaaaggccgcgtcatccgcgtcgag
cggagctag
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