Tardiphaga alba: RPMA_16220
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Entry
RPMA_16220 CDS
T09683
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
talz
Tardiphaga alba
Pathway
talz03030
DNA replication
talz03430
Mismatch repair
talz03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
talz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
RPMA_16220
03430 Mismatch repair
RPMA_16220
03440 Homologous recombination
RPMA_16220
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
talz03032
]
RPMA_16220
03400 DNA repair and recombination proteins [BR:
talz03400
]
RPMA_16220
Enzymes [BR:
talz01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
RPMA_16220
DNA replication proteins [BR:
talz03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
RPMA_16220
DNA repair and recombination proteins [BR:
talz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
RPMA_16220
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
HHH_3
DUF655
T2SSK
HROB
Amidohydro_1
Motif
Other DBs
NCBI-ProteinID:
QUS40206
LinkDB
All DBs
Position
complement(3480188..3483664)
Genome browser
AA seq
1158 aa
AA seq
DB search
MSERPAATTPGFVHLHVHSAYSLLKGSIKVAKLADLAKADHQPALALTDMDNMFGALEFS
EKLAGSGIQPIVGVELAVDFGDQDPNARNAHAILQPRMVLLATRERGYSSLMRLNSRAFL
ETPVHQSPHIKLDWLKDEAEDVIVLTGGPDGPLAQALIADQAELAAQRCEQLASLFGDRL
YIELQRHNIEKERRAEAGLIDLAYSRGIPLVAANEPYFATAEDYEAHDALLCIAGGRIIA
ETDREQLTSDHRFKTRAEMAVLFADIPEALASTVEIAERCAYRPRTRKPILPRFTVGAGS
NAEAAAQEETDELRRQAQEGLDRRLKVHGLSQGRSEEDYRARLDFELGVIARMNYAGYFL
IVSDFIKWAKLQGIPVGPGRGSGAGSLVAWVLTITDLDPLQFNLLFERFLNPERVSMPDF
DIDFCQDRRGEVISYVQQRYGRDQVAQIITFGTLQARGVLRDVGRVLQMPYGQVDKLTKL
VPQNPAAPVTLKQAIEDEPKLQAARDEDPIVARAFDIAQKLEGLTRHASTHAAGIVIGDR
PLSELVPMYRDPKSDMPVTQFNMKWVEPAGLVKFDFLGLKTLTVLDVACKLLKQRNIHVD
LATTPITDADSYSMLARGEVVGVFQVESAGMRRALVDMRPDRFEDIIALVALYRPGPMAN
IPTYCARKHGDEEPEYLHPIIEPILKETFGVIIYQEQVMQIAQVMAGYSLGDADLLRRAM
GKKIRAEMEKQRAIFVEGSVKNGVPKGQADTIFDLLAKFADYGFNKSHAAAYALVSYHTA
YMKAHYPVEFIAASMTLDMSNTDKLSEFRAEAQRLGIKVEAPNINRSGVTFEVSENTIYY
ALAALKGVGAGAVEQIVAERNKNGLFTSLADFASRVSPKAVNKRIIETLAAAGAFDTLDP
HRARVHGGADSILAACQRANEAATSGQNDMFGGAVDAPTVMLPQIDNWLAAEKLRKEYDA
IGFFLSGHPLDDYATALKRLRVQSWAEFCKAVKTGATAGRVAATVVSRMERRTKTGNKMG
IMGLSDPTGHFEAVLFSEGLAQFRDVLEPGTAVLLQLGAELQGEDVRARVLNAEPLDAAA
AKTQKGLRIVMKDTKALDSLEKRLQKQVGPGAGGDVSIVLRLDLQTEVEFKLDGRFVVSP
QIAGAIKAVTGVEMVETL
NT seq
3477 nt
NT seq
+upstream
nt +downstream
nt
atgagtgaacgtccagccgcaaccacacccggctttgtccatctgcacgttcattcggcc
tattcgctgctgaagggctcgatcaaggttgccaagctggcggatctggccaaggccgac
catcagccggcgctggcgctgaccgacatggacaacatgttcggtgcgctggaattctcc
gagaagctggccggttccggcatccagcccatcgtcggcgtcgaactcgccgtcgatttc
ggcgatcaggatcccaatgcgcgcaatgcgcacgccatcctgcaaccgcgtatggtgctg
ttggcgacgcgcgagcgtggctattcgagcctgatgcggctcaattcccgcgcattcctc
gaaacgccggtgcatcagtcgccgcatatcaagctcgactggctgaaggacgaggccgag
gacgtcatcgtgctcaccggcggccccgacggcccgctggcgcaggcactgatcgcggat
caggccgaactcgcagcacagcgctgcgagcaactcgccagtctgttcggcgatcgcctc
tacatcgaattgcagcgccacaatatcgagaaggagcgccgcgccgaagcggggctgatc
gatctcgcttatagccgcggcattccgctggtggcagccaacgaaccgtattttgcaaca
gccgaggactatgaggcgcatgacgcgctgctgtgcatcgctggcggccgcatcattgcc
gagaccgatcgcgagcaactaacctccgaccatcgtttcaagacccgcgccgaaatggcc
gtgttgttcgccgatattccggaagcgctggcctcgacggtcgagatcgccgagcgctgc
gcctatcgcccgcgcacgcgaaagccgatcctgccgcgcttcaccgtcggtgccggcagc
aatgccgaggccgccgcgcaggaggagactgacgaactacgccgccaggcgcaggagggc
ctcgaccgccggctcaaggtgcacggcctgtcgcagggacgcagcgaggaagactatcgc
gcgcggctcgatttcgagctcggcgtcatcgcccgcatgaactatgccggctacttcctg
atcgtgtcggacttcatcaaatgggcgaagctgcagggcattccggtcgggccgggccgt
ggttcgggcgcgggatcgctggtcgcctgggtgctgacgatcaccgacctcgatccgctg
cagttcaacctgctgttcgagcgcttcctcaatccggaacgtgtctcgatgcccgacttc
gacatcgacttctgccaggaccgccgcggcgaagtgatctcttatgtgcagcagcgctat
ggccgcgatcaggtcgcgcagatcatcaccttcggtacgctgcaggcgcgcggcgtgttg
cgcgacgtcggccgcgtgctgcagatgccttacgggcaggtcgacaagctgaccaagctt
gtgccgcagaatccggcggcgcctgtgacactgaagcaggcgatcgaggacgagccgaaa
ctgcaggcggcgcgcgatgaagacccgatcgtggcgcgcgctttcgatattgcgcagaag
cttgaaggcctgacgcgccacgcctcgacgcatgcggccggcatcgtcatcggcgaccgg
cctctgtccgaactggtgccgatgtatcgcgatccgaaatcggatatgccggtcacccag
ttcaacatgaaatgggtcgagcctgcgggtctcgtgaagttcgactttctcggcctgaag
acgctgaccgtgctcgatgtcgcgtgcaaactgctcaagcagcgcaacatccatgtcgat
cttgccacgacaccgatcaccgatgccgacagctattccatgctggcgcgtggcgaagtg
gtcggcgtgttccaggtggaaagcgcgggtatgcggcgcgcgctcgtggacatgcgcccc
gaccgtttcgaggacatcatcgcgctggtcgctttgtatcgaccgggtccgatggccaac
atcccgacctattgcgcgcgcaagcacggcgacgaggagccggaatatctgcacccgatc
atcgaaccgatcctgaaggagacgttcggcgtcatcatctatcaggaacaggtgatgcag
atcgcgcaggtgatggcgggctattcgctcggcgacgccgatctcttgcgtcgcgccatg
ggtaagaagatccgcgcggagatggaaaagcagcgcgcgatcttcgtcgagggctcggtg
aagaacggcgtgccgaaagggcaggccgacacgatcttcgatctgctggcaaaattcgcc
gactacggcttcaacaagagccacgcggcggcttacgcgctcgtctcctatcacaccgcc
tatatgaaggcgcattatccggtggagttcatcgccgcgtcgatgacgctggatatgagc
aacacggacaagctgtcggaattccgcgccgaggcgcagcggctcggtatcaaggtcgag
gccccgaacatcaatcgttcgggcgtgaccttcgaggtcagcgagaacacgatctattat
gcgctggctgcgctgaagggtgtcggcgccggtgcggtcgaacagatcgtggctgagcgc
aacaagaacgggctgttcacatcgctcgccgacttcgcgtcgcgcgtgtcgccgaaggcg
gtgaacaagcgcatcatcgaaacgctggccgcggctggcgctttcgatacgctcgatccc
catcgcgcccgtgtccatggcggcgccgacagcattctggcggcctgccagcgggccaat
gaagcggcgacctctggccagaacgacatgttcggcggcgctgtcgatgcgccgaccgtg
atgctgccgcagatcgacaactggctggcggccgagaagctgcgcaaggaatatgacgcc
atcggcttcttcctgtccggccatccgctcgacgattacgccaccgcgctgaagcggctg
cgggtgcagagctgggctgagttctgcaaggccgtgaagaccggtgccaccgcgggcagg
gtggctgcgacggtggtgtcgcgcatggagcggcggaccaagaccggcaacaagatgggc
atcatgggcctgtcggacccgaccggtcatttcgaggcggtgctgttctccgaaggcctc
gcccagttccgcgacgtacttgagcccggtaccgccgtgctgctgcaactcggcgccgag
ttgcagggcgaagacgtccgcgcccgcgtcctcaatgccgaaccgctggatgccgccgcc
gccaagacccagaagggcctgcggatcgttatgaaagacaccaaggccctggattcgctg
gaaaaacgcctgcagaagcaggtcggtcccggcgctggtggcgacgtctccatcgtgctg
cggctggatctgcagaccgaggtcgaattcaagctcgacggccgcttcgtcgtctcgccc
cagatcgcgggggcgatcaaggcggtgacgggcgttgagatggtggagacgctctaa
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