Tardiphaga alba: RPMA_16935
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Entry
RPMA_16935 CDS
T09683
Name
(GenBank) lytic transglycosylase domain-containing protein
KO
K08309
peptidoglycan lytic transglycosylase [EC:
4.2.2.29
]
Organism
talz
Tardiphaga alba
Brite
KEGG Orthology (KO) [BR:
talz00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
talz01011
]
RPMA_16935
Enzymes [BR:
talz01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
RPMA_16935
Peptidoglycan biosynthesis and degradation proteins [BR:
talz01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
RPMA_16935
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
SLT
Extensin_1
Phage_lysozyme2
TPR_2
TPR_4
TPR_16
Motif
Other DBs
NCBI-ProteinID:
QUS42453
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Position
3625471..3627825
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AA seq
784 aa
AA seq
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MLSVSIPALEAGAAGTTDASKTSQAAKGAAAKPAAAKPAAAKGAADKSAPKPAAAKPAAS
RPAPAKSTAAKSDAAKPAASKPSAAKTTAAKPAAAKPAAAKPATAPAAHTGTVNPAPVIQ
PATRQHAVAPPAAKKPPPARAAIAATSSTSQADGQALENVIELVRKGKSGEAGQVAQTIG
DPVARKLGEWIYLRSENNGASVERYRAFIAANPSWPSQTFMRRRSEAALWDDRRDDSAIQ
AYFADEKPISAKGKFALAKSLLARGDRATAERLIRDAWRSDPISGDTENMAIDQFGALIT
PGDHKARMDMLLYGSDGDPGLRSAKRLGGAQMALARARIAVTKKASNAKALLDGVPHELH
SDPGYLFSRIQQLRRDERFADAARLMSSVPKDISRLHNLDEWWIERRLLSRKLLDIGEHR
AAYVVARDAALPARDIYKTEQEFTAGWIALRFLKDPATASQHFARIGVGSVNPTALARAG
YWQGRAAEAAGRSSEARAAYTRAAEQSTSYYGQLARGKLGLPQLDISGSLSSRARGSDRL
EIVRAVQLLYALDEKEIAIPIFADVGENGDPEAVLGLSELAAQNKDARGMLLVGKAALNR
GLPFDHYAYPTMGIPSYRPVGPEVEPAVVYAIARQESAFNPAVVSPANAYGLMQVTPSAA
QYVAKRHGATYDLARLKNDSTYNAALGAAELGGLLEDYRGSYIMTFAGYNAGRGSVRKWI
ERYGDPRDPNVDAVDWVESIPFAETRNYVQRIMENLQVYRARFGGGTKLQIDADLHRGRG
SSVE
NT seq
2355 nt
NT seq
+upstream
nt +downstream
nt
ctgctcagcgtctcgatcccggcactcgaagccggcgccgccggtacgaccgacgcatca
aagaccagccaggcagccaaaggcgccgcggccaagccggccgccgccaagcccgcagca
gccaaaggcgcagcggacaaatcggctccgaagcctgctgcagccaagcctgcagcctcc
agaccggctcccgccaaatccacggccgcgaagtccgatgcagcaaagccggcggcatca
aagccttcggccgcgaagacgacggccgccaaacccgctgcggcaaaacccgccgcggcc
aagcccgccacggcgcccgcagcacatacgggcacggtcaatccggcgcctgtgatccag
ccggccacgcgccagcatgccgtcgccccgccggccgcgaagaagccgccgcctgcccgc
gcggcgatcgccgccaccagctcaacctcgcaggccgatggccaggctctggaaaacgtc
atcgagctcgtccgcaagggcaagagcggtgaagccggccaggtcgcgcagaccatcggc
gaccccgtcgcgcgcaaactcggtgagtggatctatctgcgcagcgagaacaacggcgcc
tccgtggagcgctatcgcgctttcatcgccgccaatccgagctggccatcgcagaccttc
atgcgccgccgcagcgaggccgcattgtgggacgatcgccgcgacgacagcgcaatccag
gcctatttcgcagatgaaaagccgatctctgccaagggcaagttcgctctggcgaagtcg
ctgctggcacgcggcgaccgcgcaacggccgagcgcttgatccgcgacgcctggcgcagc
gatccgatttccggcgacaccgagaacatggccatcgaccagttcggcgctctgatcaca
cccggcgatcacaaagcgcgcatggacatgctgctctatggcagcgatggcgatcccggc
ctgcgctcggcgaaacgcctcggcggcgcgcagatggcgctggcgcgggcgcgcatcgct
gtcaccaagaaggcatcgaatgccaaggcgctgctcgatggcgtgccgcacgaattgcac
agcgatcccggctatctcttcagccgcatccagcaactgcgccgtgacgaacgttttgcc
gacgccgcgcgcttgatgtcgtccgtgccgaaggacatcagccgcctgcacaatctggac
gaatggtggatcgagcgccgcctgctgtcgcgaaaactgctggatataggtgagcatcgc
gctgcctatgtggtggcgcgtgatgcggccctccccgcacgcgacatctacaagaccgag
caggaattcaccgccggctggatcgcactgcgcttcctgaaggatcctgcgacagcatcg
cagcatttcgcgcgcatcggcgtcggcagcgtcaatccgactgcgctggcccgcgccggc
tactggcaaggtcgcgcggcggaagccgccggccgcagctccgaagcgcgcgcggcctat
acgcgcgcggcagaacaatcgaccagctattacggtcagcttgcgcgcggaaaactcggc
ctgccgcaactcgacatcagcggctcgctgtcatcgcgcgcgcgcggatccgaccgcctc
gaaatcgtccgcgccgtgcagctgctgtatgcgctcgacgagaaggagatcgcgattccg
atctttgccgatgtcggcgagaacggcgatcccgaagcggtgcttggcctcagcgaactg
gcggcgcaaaacaaggacgcgcgcggcatgctgctggtcggaaaggctgcgctcaatcgc
ggcctgcccttcgatcactacgcctatccgaccatgggcattccgagctatcggccggtc
ggaccggaagtcgagcccgccgtcgtctatgcgatcgcgcggcaggaaagcgcgttcaac
ccggccgtcgtgtcaccggccaatgcctatggcctgatgcaggtgacgccatcagccgcg
caatatgtcgccaagcgccacggcgcgacttacgacctcgctcggctgaagaacgactcg
acctataatgccgcactcggcgccgccgaactcggcgggctgctggaagactatcgcggc
tcctacatcatgaccttcgcaggctacaatgccggccgcggtagcgtgcgcaaatggatc
gagcgctacggcgatccacgcgatcccaatgtggatgccgtggactgggtggagtcgatt
cccttcgccgagacgcgcaactacgtccagcgcatcatggaaaacctgcaggtctatcgc
gcccgcttcggcggcggcaccaagctgcagatcgacgccgacctgcatcgcggccgcggc
agcagcgtcgagtaa
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