Tardiphaga alba: RPMA_17480
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Entry
RPMA_17480 CDS
T09683
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
talz
Tardiphaga alba
Pathway
talz03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
talz00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
RPMA_17480
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
talz03021
]
RPMA_17480
03400 DNA repair and recombination proteins [BR:
talz03400
]
RPMA_17480
Enzymes [BR:
talz01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
RPMA_17480
Transcription machinery [BR:
talz03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
RPMA_17480
DNA repair and recombination proteins [BR:
talz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
RPMA_17480
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
DUF211
DUF4249
IDH
Motif
Other DBs
NCBI-ProteinID:
QUS42466
LinkDB
All DBs
Position
complement(3732742..3733773)
Genome browser
AA seq
343 aa
AA seq
DB search
MGDTVTIQKNWQELIRPNKLQVTPGSDPSRFATLVAEPLERGFGQTLGNALRRILLSSLQ
GAAVQAVHIDGVLHEFSSIAGVREDVTDIVLNVKDIAIKMQGEGPKRMVVKKQGPGAVTA
GDIQTVGDVVVLNPDLQLCTLDDGAEIRMEFTVSGGKGYVAAEHNRPEDAPIGLIPVDSL
YSPVRKVSYKVENTREGQILDYDKLTMTIETNGALTPEDAVAYSARILQDQLNVFVNFEE
PRKEVAQEVIPDLAFNPAFLKKVDELELSVRSANCLKNDNIVYIGDLVQKSEAEMLRTPN
FGRKSLNEIKEVLAQMGLHLGMEVPGWPPENIDELAKRFEDHY
NT seq
1032 nt
NT seq
+upstream
nt +downstream
nt
atgggtgacacagtgacgatccagaaaaattggcaagagcttatccgccccaacaagctg
caggtaacccctggcagcgatccctcgcgtttcgcgaccctcgtcgctgagccgctcgag
cgtggtttcggtcagaccctcggcaacgcgctgcgccgtatccttttgtcgtcgctgcag
ggcgctgccgttcaggccgtccacatcgatggcgttctgcacgagttctcctcgatcgcc
ggcgtgcgtgaagacgtcaccgacatcgtgctgaacgtgaaggacatcgcgatcaagatg
cagggcgaaggcccgaagcgcatggtcgtgaagaagcagggcccgggcgccgtcaccgct
ggtgacatccagaccgtgggcgacgttgtcgtcctcaatcccgacctgcagctctgcacc
ctcgacgatggcgctgaaatccgcatggaattcaccgtgtcgggtggcaagggctatgtc
gctgccgagcacaaccgtccggaagatgcgccgatcggcctgatcccggtcgatagcctg
tattcgccggttcgcaaggtcagctacaaggtcgagaacacccgtgagggccagatcctc
gactacgacaagcttaccatgaccatcgagaccaacggcgcgctgacgcccgaggacgcg
gttgcctattcggcccgcatcctgcaggaccagctcaatgtgttcgtgaacttcgaagag
ccccgcaaggaagtcgctcaggaagtcatcccggatctcgctttcaacccggccttcctc
aagaaggtcgacgagctcgagctctctgtgcgttcggcaaactgcctgaagaacgacaac
atcgtttacatcggcgacctcgttcagaagtcggaagcggaaatgctccgtaccccgaac
ttcggccgcaagtcgctgaacgaaatcaaggaagtgctggcccagatgggtctgcatctc
ggcatggaagtgcccggttggccgccggagaatatcgacgagctggccaagcgcttcgaa
gaccactactga
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