Thermovibrio ammonificans: Theam_0285
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Entry
Theam_0285 CDS
T01391
Name
(GenBank) DNA-directed RNA polymerase, alpha subunit
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
tam
Thermovibrio ammonificans
Pathway
tam03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
tam00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
Theam_0285
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tam03021
]
Theam_0285
03400 DNA repair and recombination proteins [BR:
tam03400
]
Theam_0285
Enzymes [BR:
tam01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
Theam_0285
Transcription machinery [BR:
tam03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
Theam_0285
DNA repair and recombination proteins [BR:
tam03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
Theam_0285
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_L
RNA_pol_A_bac
RNA_pol_A_CTD
HHH_5
RNA_pol_L_2
RAD51D_N
Calmod_bind_M
Motif
Other DBs
NCBI-ProteinID:
ADU96258
UniProt:
E8T4C3
LinkDB
All DBs
Position
256829..257779
Genome browser
AA seq
316 aa
AA seq
DB search
MVEFITPERFTWEEHTNTYGRFVVEPLEKGYGVTIGNALRRVLLSSIEGAAPTAVKFEGA
YHEFTTLPGVVEDLTEIVLNIKKLRFVLHGEGPVFIELKKKGPGKVYAKDFELPSQLELL
TPDQEIATLDNESSEIEIHLRVDKGKGFVLSEDIQEIFDISTLGWIPLDADFSPIKKVTF
KVEDTRVGRRTDYNKLTFEIWTDGSITPKDAVVRASNILIDHFSQIRDRLVEALFAVEEA
QEPKEEVSEVLNQTLEEAGLSGRALKVLKEHGIETVKDLVALDRKELESLKGLGKKSIAD
IEAFLSQLGLELGGGK
NT seq
951 nt
NT seq
+upstream
nt +downstream
nt
atggttgaatttataactcctgagaggttcacctgggaggagcataccaacacttacggt
aggttcgtggttgaacctctcgagaaggggtacggcgttaccataggtaacgcccttcgt
agggttctgctctcctctatagagggtgctgctcctactgccgttaagtttgagggggct
tatcacgagtttacgactctgccgggggttgttgaggatttaacggagattgtccttaac
ataaagaagcttaggttcgtcctccacggcgaggggccggttttcatagagctgaagaag
aaagggcccggtaaggtttacgccaaggactttgagcttccgtctcagcttgagcttctc
acccccgaccaggagatagctaccctcgataacgagtcttcggagatagagattcacctc
agggtagataaaggaaaggggttcgttctctccgaagatatccaggagattttcgacatc
tccacgctcggctggataccccttgatgccgacttctcccccataaagaaggttacattt
aaagttgaggatacgagggtaggccgcagaaccgactacaacaagctcacctttgagatt
tggacagacggcagcataaccccgaaggacgcagttgtcagggcgtccaacatcctcata
gaccacttctctcaaatcagggataggctcgttgaggccctttttgccgttgaggaggcc
caagaacccaaagaggaggtttcggaggttctcaatcagacccttgaggaagccggactt
tccggaagggcccttaaagtgctcaaagagcacggtatagaaaccgttaaagaccttgtg
gcccttgataggaaggagcttgagagtctcaaaggtcttggtaagaagtctattgcagac
atcgaggcctttctctctcaacttggacttgaactgggcggaggtaagtag
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