Thermovibrio ammonificans: Theam_1207
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Entry
Theam_1207 CDS
T01391
Name
(GenBank) metal dependent phosphohydrolase
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
tam
Thermovibrio ammonificans
Pathway
tam03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tam00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Theam_1207
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tam03019
]
Theam_1207
Messenger RNA biogenesis [BR:
tam03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
Theam_1207
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Y_N
HD
KH_1
HDOD
KH_KhpA-B
YtxH
Motif
Other DBs
NCBI-ProteinID:
ADU97171
UniProt:
E8T2W2
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All DBs
Position
1188710..1190383
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AA seq
557 aa
AA seq
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MESILVAIFAVLSGLAGGYVVGTKRGQKIKENLEREIVERAKEEANQIVERAKQEAQELK
KKAEETVKEAQKRYDEMKKQALLEAKEELLKERERIEEELKEKRREVAELEKRLLRREEY
LDKRESALDKREESLDKRAQFLDKLEAELEEKRSEVERLEAELLEKEVELSRLIDEEVKK
LEEIAQMSREEAKEELMKRMEEEIRRDLAVKFKRIEEEFEQSAEKRAKKILATTIQRLAS
DIVAETTVTVVDLPNNEMKGRIIGREGRNIRAFELATGVDLIIDDTPEAVTISCFDPVRR
EIARIALERLVADGRIHPARIEEVVEKVQQEIEQEIINAAEEVLFELGIDNVHPELKKLL
GRLKFRTSYGQNVLQHVKEVAYLAGMIAAEIGADVQLAKRAGLFHDIGKAVTHEVEGSHA
IIGSEILKKYGEPEAVVNAAAAHHGEVEFTTIESVCAAAADALSAARPGARRESLEAYIK
RIEKLESIAESFPGVMKAFAIQAGREIRIMVEPDKITDEEAAFLAHQISKKIEEEVQYPG
QIKITVIRETRAVDYAK
NT seq
1674 nt
NT seq
+upstream
nt +downstream
nt
atggaatcgatactggttgcgatatttgcagtgctctcgggccttgccgggggctacgtt
gtgggcaccaaaaggggccagaaaatcaaggaaaaccttgaaagggaaatcgttgaaagg
gcaaaggaagaggcaaaccaaatcgtagaaagggccaagcaggaggcccaggagctcaag
aagaaggccgaagagaccgtaaaagaggcccaaaagcgctacgacgagatgaaaaaacag
gcactccttgaggcaaaggaggagctccttaaagagagggagcggatagaggaagagctt
aaagaaaagcgcagagaggttgccgagctcgaaaagaggctcctgcgcagagaagagtac
ttagacaagagggagtcggcccttgataagagggaggagagcttagacaaaagggcccag
ttcctcgataagctcgaggcggaactggaggagaagaggagcgaggtggagaggctcgag
gcggagctcctcgagaaggaggttgagctgtcgcggctcatagacgaggaggttaagaaa
ctcgaagagatagcccagatgagccgtgaagaggcgaaagaggagctgatgaagcggatg
gaggaggaaatccgcagggaccttgcggtgaagttcaagaggatagaggaggagtttgag
cagagcgccgaaaaacgggccaagaagatactggccaccacaatacagcggctcgcaagc
gacatagttgctgaaacaaccgtaaccgttgtagaccttcccaacaacgagatgaaggga
aggataatcggaagggaaggaaggaacataagggcctttgagcttgccaccggagtagac
ctgataatagacgacacgccggaggcggtaacaatctcgtgcttcgaccccgtaaggcgt
gaaatagccagaatagccttagaaaggcttgttgcagacggccgcatccaccccgcaagg
atagaggaggttgtagagaaggttcagcaggagattgagcaggagataatcaacgccgcc
gaagaggtgctcttcgagctgggaatagacaacgtccacccagagctgaagaaactcctg
ggcaggctgaagttcagaacgagctacggccaaaacgttctccagcacgttaaagaggtt
gcctacctcgccggaatgattgccgccgaaatcggagcagacgtccagctcgccaagagg
gccggactcttccacgacatcggaaaggcggtaacccacgaagttgaaggctcccacgcc
ataatcggctccgaaatcctcaaaaagtacggcgagcccgaggcggttgttaacgccgca
gccgcccaccacggagaggtggagttcacaacgatagagtcggtgtgtgctgcagcagcc
gacgccctttctgcagcaaggcccggagcgagaagggagagccttgaggcctacatcaag
aggatagagaagctcgagagtatagccgagtcgttcccgggcgttatgaaggcctttgca
atccaggcgggaagggaaatcaggattatggttgagcccgacaagattaccgacgaagag
gcggcgttcttggcacaccagatttccaagaaaatcgaggaggaggttcaatacccgggt
cagattaagattaccgttataagggaaacgagggccgtagactatgcaaagtaa
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