Thermovibrio ammonificans: Theam_1502
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Entry
Theam_1502 CDS
T01391
Name
(GenBank) DNA polymerase III, alpha subunit
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
tam
Thermovibrio ammonificans
Pathway
tam03030
DNA replication
tam03430
Mismatch repair
tam03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
tam00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Theam_1502
03430 Mismatch repair
Theam_1502
03440 Homologous recombination
Theam_1502
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tam03032
]
Theam_1502
03400 DNA repair and recombination proteins [BR:
tam03400
]
Theam_1502
Enzymes [BR:
tam01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Theam_1502
DNA replication proteins [BR:
tam03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Theam_1502
DNA repair and recombination proteins [BR:
tam03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Theam_1502
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DUF6282
HHH_3
tRNA_anti_2
Motif
Other DBs
NCBI-ProteinID:
ADU97463
UniProt:
E8T4K5
LinkDB
All DBs
Position
1463599..1467051
Genome browser
AA seq
1150 aa
AA seq
DB search
MVRKGDFVHLHLHSQYSILDGAIKVKDLVKKAKELGMPAVAITDHGNMFASYELYKACKE
EGIKPIIGQEFYIAKGSRFDRKKGGEGEKGSYHLILLAKNDKGLKNLMKLSTIGFTEGFY
YKPRIDKEVLEKYSEGLIALSACIQGEVPLLYLMGKEEEARRAAQWYKELFGEDFYLELQ
YHGIPEQKKANEFLIKLAKELDIELVATNDAHYLNKEDWEAHDVLLCLQTGKKLSDEKRM
RFPSREFYVKDAQEMLEVFKEVPQAVFNTLKIAEKVEERLETFENKGYLLPKYEVPEGHT
YDSFLRKLAEEGLERRFKEQGITDGEKKQVYYERLNHELKIINDMGFPGYFLIVWDFINW
AKRNGIPVGPGRGSAAGSLVAYAIGITDIDPIRFNLLFERFLNPERVTMPDIDVDICQDG
RDRVIQYVREKYGEDKVCQIITFGTMKTKMVIRDVGRVLGIPPKEVDKLAKLIPDDAKSV
EDAVERAPEIRELAEKDETIARLIKIAKRLQGLARQTGVHAAGVVIAPETLTDYIPLAKS
KDGDITTQYDMGQVEALGLLKMDFLGLKTLTIIDRTIKLIKERHGVEIVPTKLPLDDPET
FKLLQSGNTVGVFQLESRGMRNLMKRLKPSVFEDIIALVALYRPGPLNSGMAESYIRRKH
GQEEVDYIFPELEPVLKETYGLFIYQEQIMQIANILAGYSLGEADLLRRAMGKKKKEIME
EQRSIFVSRAVERGYPREKIEKLFDDIAKFAEYGFNKSHSAAYGFLAYVTAYLKAHYPKE
LFATMMSIDFDKTDEIVKFIKDCKENGINVLPPDINRSGAYFEIEGEAIRFGLAGIKGVG
EKAALHIEEVRKEGGEFKDLFDFCRRVDLKVVNRKVIEALIKAGAFDSTGINRASNLAAL
DRAMNAAQSIQKSQSKGLLSLFGEAESIVQVEFPEVEEWPERVKLEYERQAIGFYLSGHP
LLEFKEIVTLAFDSTAEKEEWKDGQELTLAGAITDVKLRRTQRGDLWATVELTDLDGSTS
VLVFPSVFKEAGEHLTEGNIVVVKGSVREEEESKSVIAKEIVPLNREIVDKITEVSIKLK
GEEITEELLKELHTFIQNHSSPDGKPVVVEAELPDCFVKLQIDPSLRLPVEPQVLRELGK
LIPKERIKVH
NT seq
3453 nt
NT seq
+upstream
nt +downstream
nt
atggtaaggaaaggagacttcgtccacctacaccttcactcccagtactcgattctcgac
ggagccataaaggttaaagaccttgtgaagaaggcaaaggagctcgggatgccggccgtg
gcgataaccgaccacggaaacatgtttgcatcctatgagctctacaaggcctgcaaggag
gagggtataaagcccataatcggccaggagttttacatagctaaaggttccaggttcgac
cggaagaaagggggagagggtgagaagggaagttaccacctgatactgctggccaagaac
gacaaaggccttaaaaatttgatgaagctcagcacaatcggattcaccgagggtttctac
tacaaacccagaatagataaggaagtccttgagaagtacagcgagggactgatagcccta
tcggcctgtatccagggcgaggtgccgctcctttatctgatgggaaaggaggaagaggcg
aggagggccgcccagtggtataaggagctcttcggggaggacttttaccttgagcttcag
taccacggaatacccgaacagaaaaaggccaacgagttcctgataaaactggcgaaagag
ctggacattgagctggttgcaaccaacgacgcccactacttgaacaaggaagactgggag
gcccacgacgtcctgctctgcctgcagaccgggaagaagctcagcgacgagaagagaatg
cgctttcccagcagggagttctacgtaaaagacgcccaggagatgctggaagtttttaaa
gaggttccccaagcggtatttaacactttaaagattgccgaaaaggtggaagagaggctg
gaaacctttgaaaacaaaggttacctgcttccaaagtacgaagtgccggagggtcacact
tacgactctttcctgcggaaactggcagaggaagggctcgagaggaggtttaaagagcag
gggattacagacggcgagaaaaagcaggtctactacgagcgcctaaaccacgagctgaaa
atcatcaacgatatgggcttcccgggctacttcctaatcgtttgggacttcataaactgg
gccaagaggaacggcatccccgtagggccgggaaggggttccgccgcaggctccctcgtg
gcctatgccataggaattaccgacatagaccccataaggttcaacctgctgtttgagagg
ttcctaaacccggaaagggtaacgatgccagatatagacgttgatatctgccaagacggc
cgagacagggttatccagtacgttcgggagaagtacggcgaagataaggtctgccagatt
atcaccttcggaaccatgaagacaaagatggttatcagggatgtgggcagggttctgggc
atcccgccgaaggaggtagataagttagccaagctcatacccgacgacgcaaagagcgtt
gaggacgcagttgagagggccccggaaatcagggagcttgccgaaaaagacgagactata
gcgaggctgataaagatagccaaaaggcttcaggggcttgcaaggcaaacgggagttcac
gcagccggagtggttatagcccccgaaaccctcaccgactacatcccccttgcaaagagc
aaagacggcgacataacaacccagtacgacatggggcaggttgaggccctgggcctgctg
aagatggacttcctgggccttaaaaccctgacaatcatagacagaaccataaagctcatc
aaggagaggcacggggtagagatagtcccgacgaagctgccccttgacgaccccgaaacg
tttaagctgctgcagtcggggaacaccgtaggggtgttccagcttgaatcccgcggaatg
agaaacttgatgaagaggctaaagcccagcgttttcgaagatatcatagccctcgtggcc
ctttaccgccccggaccgcttaactccggaatggccgagagctacataaggaggaagcac
ggccaggaggaggtggattacatcttccccgagctcgagcccgttctgaaagagacctac
ggcctcttcatctatcaagagcagattatgcagatagcaaacatccttgcaggttactct
ttgggtgaggccgaccttttaaggcgggcaatgggtaagaagaagaaggagattatggag
gagcaaagaagcatattcgtaagcagggccgttgagaggggctacccgagggagaagata
gagaagctctttgacgacatagcgaagtttgcagagtacggttttaacaagtcccactcg
gccgcttacggcttccttgcctacgtaaccgcctacctgaaagcccactacccgaaagag
ctgtttgcaactatgatgtcgatagactttgacaagaccgacgaaatcgtaaagttcatc
aaggactgtaaggagaacggaataaacgtccttccgcccgacatcaacagaagcggcgca
tactttgagatagagggcgaggcgattaggttcggccttgcaggtattaaaggggttgga
gagaaggccgccctccacatagaggaagtgcgaaaggaggggggtgagtttaaagacctg
tttgatttctgcaggagggtagaccttaaagtggttaacaggaaggttatagaggccctg
ataaaggccggagcttttgactcaacgggcataaacagagcttccaaccttgcggccctc
gacagggccatgaacgccgcccagagcattcagaaatcccagagcaaagggctcctcagc
ctcttcggagaggccgagagcatagtccaggttgagtttccggaagttgaagagtggccg
gagagggtcaaactggagtatgagcgccaggccataggcttttacctttcgggccacccg
ctacttgagttcaaagagatagttacgcttgcctttgactcaactgccgagaaggaagag
tggaaagacggccaagagctcactctggccggagcgataacggacgtgaagctccgaagg
acccaaaggggcgacctttgggcaacggtggagcttaccgacttagacggcagcacgtcg
gtccttgttttcccgagcgttttcaaggaggccggagagcaccttacagaggggaacata
gtggtggttaagggaagcgttagggaggaggaagagagcaagagcgtaatagccaaggag
atagttcctctgaacagggagatagtggataaaataacggaagtttccattaagctcaaa
ggagaggagataaccgaggagctcctcaaagagcttcacaccttcatccagaaccactcc
tctcccgacggtaagccggttgtagttgaggcggagctgcccgactgctttgtaaaattg
caaatagacccgagcctccgactacccgttgaaccacaagttctaagggagctcggcaag
ctgatacctaaggagagaataaaggtccactga
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