Temnothorax americanus: 143893376
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Entry
143893376 CDS
T11456
Name
(RefSeq) DNA excision repair protein ERCC-6
KO
K10841
DNA excision repair protein ERCC-6
Organism
tame Temnothorax americanus
Pathway
tame03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
tame00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
143893376
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tame03036
]
143893376
03400 DNA repair and recombination proteins [BR:
tame03400
]
143893376
Chromosome and associated proteins [BR:
tame03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
143893376
DNA repair and recombination proteins [BR:
tame03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
Other TCR factor
143893376
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
HDA2-3
Motif
Other DBs
NCBI-GeneID:
143893376
NCBI-ProteinID:
XP_077254782
LinkDB
All DBs
Position
Unknown
AA seq
1065 aa
AA seq
DB search
MAEISNNDGSASCLVDDSGNMLNNFLNNLPEIVSVKTEDSILQKVSEHIRCTATKSNDEI
QENDVELNTEGNVEVNGKEDHRAELQKRVEIGEITPFEAVFKQSTLEQKEGTTNKGAQSF
DLEKYFKQQAALAEQKKKLKKPSKAPSDKDHSPPVKKTKLPSTDAKVNKKCQKSRHENSK
DDTLQSIDKADSNVAIADSSSESEYIPSDDELDFDVEDKASKKRKTAVKSGCTRIKRTRD
DGNNQLFKQRMETNTFPRDEAMHKINSLFKVPLCIWEKLYRYQRIAVQWLWELHGRKLGG
LLSDEMGLGKTVEVIAFLAGLDCSELLSHNGRYRGLGSTIVVCPATLMEQWVKHFHEWWP
FFRVVVLHHSSGYNGDPESLIESLQTGGILVTSYNGVLKHKDLLVSSQWHYVILDEGHKI
RNPQAKVSQAVKRLSTPHRLLLSGSPMQNSLKELWSLFDFILPGKLGTLPVFLEHCAAPI
TRGGYANATPLQEATALQIATMLKNTITPYMLRRTKTDVKHHLTLPEKNEQVLFCSLTDE
QKKLYKRYLSSDDVSFVLQERNNRQDSGRYRARFLIALSALRKICNHPDLFLYTREQDSD
EDIDLSEEHLEKFGYWKRAGKMTVVRSLLKIWQKQGHRVLLFTQGRQMMHVLESLLQSER
YTYLRMDGTTIMSQRQQTIHKFNNDTSYFVFLLTTRVGGLGVNLTGANRVIIYDPDWNPA
TDAQARERAWRIGQNKQVTIYRLITAGTIEEKMYHRQIFKLLLSNKVLDDPRQRRLFKTT
DLVELFNLNEPIDGEFSESDRLFRESKLTPVSGGFSLSKIEEMKKLASILSKKISANVSK
RDENENANSTCERKSNEENDNSSRVEAPAVENDSLVDQSLSSDQNNTQKTPSKLNEDFNT
NSDASIERNSNIENKNTFKKNNCEQNVISVRSPNNSSVEKQSNLNNDKIKSSSTRKHKKH
KRDSHSGKTNVSAIFEGERVSCLIGRRLGRSDEKEESVSTADDDYVLRKLFAKSTVSSAF
KHEAVLSNACHNSDSENPMQRFARESAQESMNFIHQSGKHCWRPA
NT seq
3198 nt
NT seq
+upstream
nt +downstream
nt
atggcagagataagcaataacgacggtagtgcgtcctgtctcgttgacgactcaggaaac
atgttaaataattttctaaataatttgccagagatagtgtctgtcaaaacggaagacagc
attttgcaaaaggtatcggagcacattagatgtaccgctacgaaatcaaacgatgaaata
caagagaatgacgtcgaattgaataccgaagggaatgtcgaagttaatggcaaagaggat
catagagcagagttacaaaaacgggtcgagattggagagattactccgtttgaagcagta
tttaaacagtcgactttggagcaaaaagaagggactacaaataaaggtgctcaatcgttt
gatcttgagaagtactttaaacagcaagctgctcttgccgagcaaaagaagaaattaaaa
aaaccatctaaggcaccttctgacaaagatcattcaccgccagtcaaaaaaacaaaatta
cctagtactgatgcaaaagtaaataaaaaatgccaaaagtccagacatgagaacagcaaa
gatgatactctgcaaagtatagataaggcagactccaatgtagcaattgctgacagcagt
tcggaaagcgaatacattcctagtgacgatgaactagatttcgacgtggaggataaggca
tctaaaaaaagaaaaactgcagttaaatcaggatgtacccgcataaaaagaactcgagat
gatggaaataatcaactattcaagcagaggatggaaacaaacacctttcccagagatgaa
gcaatgcacaaaattaatagtctttttaaagtgccgctatgcatttgggaaaaattatat
aggtatcaaaggattgcagttcaatggctttgggaattacatggtcgtaaattaggaggc
ctcttgagtgacgagatgggattaggaaaaactgtggaagttattgcattcctcgcgggt
ttggattgtagcgaattgctctctcacaacggaaggtacaggggattaggctcgactata
gttgtatgtcctgctactttaatggagcaatgggtgaagcattttcacgaatggtggcct
ttcttcagagttgttgtgcttcatcattctagtggttacaatggtgatccagaaagtttg
atagaatccctacaaactggcggcatacttgttacttcgtacaacggagtcctcaaacac
aaagatttgcttgtgtccagtcagtggcattatgttattctagacgaaggccataagatt
cgtaatccgcaagcgaaggtgagccaagcggtgaaacgattgtcgacaccgcatcgatta
ctgttgagcggtagtccgatgcagaattctttgaaagaactatggtctttgttcgatttc
attctgcctggtaaactaggcactctgcctgtatttctggaacattgcgcggctcccata
acacgcggcggttatgcgaatgctacaccgttacaggaagcaacggccctccaaatagcc
actatgttgaaaaatactatcacgccatacatgcttcgaagaacaaagaccgatgtgaaa
catcatcttaccctaccggagaaaaatgagcaggtgttattttgcagcttaacggatgag
cagaagaaactgtataaaaggtatctgagctccgacgatgtgtcctttgttcttcaggag
agaaataatcggcaagacagtggaagatacagggcgaggtttctcattgccttgtcagca
ttgagaaagatatgcaatcatccggacttgtttttgtacaccagagaacaagattccgat
gaagatatcgatttgtccgaagaacacttagagaagtttggttattggaaacgtgctgga
aaaatgaccgtggttcgatctcttctaaaaatctggcagaagcaaggacacagagtgctg
ctttttactcagggaagacagatgatgcacgttttggagtctcttttgcaaagtgaaagg
tatacttatttgagaatggatgggacaacaataatgtctcagcggcagcaaacgattcac
aaatttaacaatgacacatcgtatttcgtgttcctgctgacgacgcgcgtaggaggtctg
ggagtaaacctgactggtgcgaatcgagtgattatttacgatcccgattggaatccagca
acggatgctcaagcgagagaacgtgcgtggagaataggccaaaataaacaagtcactatc
tatagattaattaccgctggtacgatagaggaaaagatgtaccacagacagattttcaag
ctattgctttcaaacaaagttcttgacgatccgcgccaacgacgtctattcaaaacgacg
gatctggtggagttattcaatctaaacgagccgatagacggcgagttttccgaatcggat
cgcttatttagagaatctaaattgacacctgtgtccggtggcttttctctcagtaagatc
gaggagatgaaaaaattagcgtcgattctcagcaagaaaataagcgccaatgtatcgaaa
cgcgatgaaaatgaaaatgcaaacagcacttgcgaaagaaagtccaacgaagaaaacgat
aattcgagtcgcgtcgaagctcccgccgtggaaaatgattcgcttgtggaccaaagctta
tcttccgatcagaacaatacacaaaaaacgccgagcaaacttaatgaagatttcaatacg
aattccgatgcaagcattgaaagaaatagcaatatagaaaataaaaacacatttaaaaaa
aacaattgtgaacagaatgtaatttcagtgagatctccaaataacagttctgtagaaaag
cagagtaatttaaataacgataaaatcaagtcatcgtctactcgtaaacacaagaagcac
aaaagggactcgcattcgggcaagacaaatgtttccgcgatctttgagggagaacgtgtt
tcttgtctgatcggtcgtcgcctgggacgttccgatgaaaaagaagaatcagtttcgacc
gcagacgatgactacgtcttgagaaagctattcgccaaatcaactgttagctcagccttc
aaacacgaagcagtgttatcgaatgcgtgtcacaatagtgacagtgagaacccaatgcaa
cgtttcgcacgtgaatcggcgcaagaaagtatgaacttcattcatcaatcgggaaaacat
tgttggagaccagcgtag
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integrated database retrieval system
