Temnothorax americanus: 143893825
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Entry
143893825 CDS
T11456
Symbol
Me31b
Name
(RefSeq) ATP-dependent RNA helicase me31b
KO
K12614
ATP-dependent RNA helicase DDX6/DHH1 [EC:
5.6.2.7
]
Organism
tame Temnothorax americanus
Pathway
tame03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tame00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
143893825 (Me31b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tame03019
]
143893825 (Me31b)
03036 Chromosome and associated proteins [BR:
tame03036
]
143893825 (Me31b)
Enzymes [BR:
tame01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
143893825 (Me31b)
Messenger RNA biogenesis [BR:
tame03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
143893825 (Me31b)
mRNA degradation factors
5'-3' decay
Decapping complex
143893825 (Me31b)
Chromosome and associated proteins [BR:
tame03036
]
Eukaryotic type
Gene silencing
piRNA pathway
143893825 (Me31b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
AAA
Motif
Other DBs
NCBI-GeneID:
143893825
NCBI-ProteinID:
XP_077255685
LinkDB
All DBs
Position
Unknown
AA seq
444 aa
AA seq
DB search
MMTETHMNSNHMLNSGLSNKSEIEKMDDVGWKAKLKIPPKDKRIKTSDVTDTRGNEFEEF
CLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDILARAKNGTGKTGAYSIPVLEQVDPR
KDVIQALVIVPTRELALQTSQICIELAKHMDIKVMVTTGGTNLRDDIMRIYQKVQVIIAT
PGRILDLMDKNVANMEHCKILVLDEADKLLSQDFKGMLDHVISRLPHERQILLYSATFPL
TVKQFMEKHLKDPYEINLMEELTLKGVTQYYAFVQERQKVHCLNTLFSKLQITQSIIFCN
STQRVELLAKKITDLGYCCYYIHAKMAQAHRNRVFHDFRAGLCRNLVSSDLFTRGIDVQA
VNVVINFDFPKMAETYLHRIGRSGRFGHLGIAINLITYEDRFNLHRIEQELGTEIKPIPK
VIDPSLYVARPEDNNSMEEGNVSK
NT seq
1335 nt
NT seq
+upstream
nt +downstream
nt
atgatgaccgaaacgcatatgaactctaaccatatgttgaattctggtttgtctaataaa
tcagagatagagaaaatggatgatgtgggttggaaagccaaattaaagattccaccaaag
gataaaagaattaaaacaagtgatgttaccgacacacgtggtaacgagtttgaagaattt
tgcctaaaacgagaactattgatgggaatttttgaaaagggatgggagaagccatcgccg
atccaagaagctagtattcctattgcactttctggtaaggacatcttggcacgagcgaaa
aatggaactggtaaaactggagcgtactcaattccagtgctggaacaggttgacccgagg
aaagacgtaatccaagcactggtaattgtgcctacaagagaattagcgctacaaacatca
cagatttgtattgagctcgcaaagcacatggatataaaagttatggttactactggagga
actaacttacgagacgacattatgaggatttatcaaaaagtacaagtgataatcgcaacg
ccaggaaggatccttgatctgatggacaagaatgtggcaaatatggagcattgtaaaatt
ctagttttggacgaagcagataaactgctgtcgcaagacttcaaaggaatgttggatcat
gtaatatcgagattaccacatgaacgtcagattttgctgtattcagctacgtttcctctg
actgtgaaacaatttatggagaaacacttgaaagatccatatgagattaatttaatggaa
gagttgactttgaaaggcgtaacacaatattacgcttttgtacaggaacgacaaaaagtt
cactgccttaacacgctattctccaagctgcaaataacgcaaagcataatcttctgtaat
tcaacgcaacgcgtcgaattgctggctaagaaaataacagaccttgggtattgctgttat
tatatacacgcgaaaatggcgcaggcacaccgaaatcgcgtattccatgatttccgtgca
ggattatgccgaaatcttgtgagcagtgatctatttacccgcggtattgatgttcaagct
gtgaacgtcgtaatcaattttgactttccgaagatggcagagacatatctgcatcgaatc
ggccgatctggaagattcggccacttaggtatagcaattaacctaatcacgtatgaagat
cgcttcaacctacaccgtatcgaacaagagcttggaacagaaattaaacctatcccaaag
gtgatagaccccagtttgtacgtggcgagaccagaagacaataatagtatggaagaaggc
aacgtgtccaagtag
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