Temnothorax americanus: 143893982
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Entry
143893982 CDS
T11456
Name
(RefSeq) spliceosome associated factor 3, U4/U6 recycling protein
KO
K22611
spliceosome associated factor 3, U4/U6 recycling protein
Organism
tame Temnothorax americanus
Brite
KEGG Orthology (KO) [BR:
tame00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tame03041
]
143893982
03036 Chromosome and associated proteins [BR:
tame03036
]
143893982
Spliceosome [BR:
tame03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
143893982
Chromosome and associated proteins [BR:
tame03036
]
Eukaryotic type
Histone modification proteins
Other histone modification proteins
143893982
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
HAT_PRP39_N
Suf
HAT_PRP39_C
HAT_Syf1_CNRKL1_N
RRM_occluded
RRM_11
RRM_7
HAT_Syf1_M
RBD_DGKtheta
RRM_3
L27_1
KorB_C
RRM_10
PhetRS_B1
LSM_int_assoc
Lsm_interact
Motif
Other DBs
NCBI-GeneID:
143893982
NCBI-ProteinID:
XP_077256054
LinkDB
All DBs
Position
Unknown
AA seq
908 aa
AA seq
DB search
MDEEMDAVNEEASPGGASDGEEMVTSETEEKADEEAADTESESDDDDEDVNETEVKALEA
SLSTNPYDYASHVALINKLHAMGELDRLRAARNNMSNVYPLSPELWLVWISDEVKLATTD
EQKAEVVELCERAVKDYVSVEVWLEYLQFSIEYMGKDEEKVGKVRQLFERALTTVGTHIT
KGAIIWEAYREYENMILTCLLSLDDTENGRKKAQLERILSLFKRQLSNPLLDMDKTYEEY
HAWCAKYGMEIDTDEKSVSKCYKRSSEKLTSFLPYEEKLVSVQGQSELLDAYKGYLLYIK
QNDLDLVTILYERAITDLSLETSIWLDYIAYLEKVSRLADVLDPIYHRASRNVPWCSTVW
QKWMRSREEWDKPISEIQKILENALSAGFSTAEDYRTLWITYLEYLRRRLEQYPDEEREK
YLDVIRKTFNRACEHLAKYFGLDGDPNCVILQYWARFEAIRADDMEQARRLWADILSQEH
SATASYWLEYIVLERCYGDSKHLRKLYQKALSSTQDWPESIANSWIDFERDKGTLEQMEF
CEAKTKEKLDKIMAERQKAQQVLSQSESSTLDKNASKRKADDGKWKNLGSSPSKIVKTDV
RVKPKLRESTLNFVSKTTNDREEAKTEVAPPPGYKTTHDEDTDDKDSQREVDDSITVFVS
NLDYTATEDEVRDALKPAGPITLLRMIRDYKGRSKGYCYVQLSSVGSVEEALKLDRTPIR
GRPMFVSKCDPNKSTRSSAFKYRSTLEKNKLFVKGLPLTLTKEELEEIFKVHGDLKEVRL
VTYRNGHSKGLAYVEYHDEATAAKALLSTDGMKIQDKVINVAISQPPDRKKPEAEENGGQ
VKSLGGTSTSRTAVGVPKTLLSMVPRSVKKNSSNGNAAPDRNTQSMSNQDFRNIFLNKKI
HVLNNSDL
NT seq
2727 nt
NT seq
+upstream
nt +downstream
nt
atggacgaggagatggatgctgtaaacgaagaagcttctccgggaggagcttcagacggg
gaagagatggtaacgagcgaaacggaggagaaagccgacgaggaagcggcagacaccgag
tccgagagcgatgacgacgacgaggatgtcaacgagacggaggtgaaagccctggaggct
tccttgtcgacgaacccgtacgattatgccagtcatgtagccctgatcaacaaattgcac
gcgatgggcgagctggaccgtctgcgagccgccaggaacaatatgagcaacgtgtatccg
ttgagccctgagctctggctcgtttggataagcgacgaggtcaagttggcgaccaccgac
gagcagaaggctgaggtggtcgaactgtgcgagcgagctgtcaaggattacgtatctgtg
gaagtatggttggaatatctacagttcagcatcgaatatatgggcaaggatgaggaaaag
gttggcaaagttcgtcaactctttgaacgtgccctgaccactgttggaacgcatatcacg
aaaggagcgataatatgggaagcgtatcgcgaatatgagaatatgatacttacttgcctg
ttgtcattggacgatactgaaaatggaagaaagaaggctcagttggaacgcatcctcagt
ttgtttaaacgtcaattatctaatcctcttttagacatggataaaacgtacgaggaatac
cacgcgtggtgcgcaaagtatggtatggaaatagacactgatgagaagtccgtatcaaag
tgctataaacggagttctgaaaaattaacgtcgttccttccttatgaagagaagcttgtc
tctgtacaaggccaaagtgaactgcttgacgcttacaaaggatatttactgtacataaaa
caaaacgatttagatcttgttacaattctatatgaaagagcaataaccgatctgagcttg
gaaacgtcaatttggttggattatatcgcttatctagaaaaagtatcgaggcttgcggat
gtattggatccaatttatcatagagcgtcgaggaacgttccatggtgctcgacagtttgg
caaaagtggatgagatcgcgtgaggaatgggacaaacctatatcagaaattcaaaagata
ttagagaatgctttgtccgctggtttttcaacggcagaagattatcgcacgctgtggatt
acgtatctcgaatatctgcggcgcagactcgagcaatatcctgacgaagagagggagaag
tatctggatgttattcgtaagacgtttaacagagcgtgtgagcatttggccaagtacttt
ggcctggatggcgatcccaattgcgttatcttgcaatattgggcgagatttgaagcgata
cgtgcagatgacatggaacaagctagaagattgtgggctgatattctttcacaagagcat
tctgcaacagcttcttactggttggaatatatagtgttagaaagatgttatggagattca
aagcatctaaggaaactatatcagaaagccttgagttccacgcaagattggccagaaagt
atagcgaactcatggatagattttgagcgtgataaaggaactttagagcaaatggagttc
tgtgaagcgaaaacgaaagagaagctcgataaaattatggcagagaggcaaaaagcgcag
caagttctttctcagagtgaatcatccacgctagataagaatgcgagtaaaagaaaagca
gatgacggcaaatggaaaaatttaggaagttccccgtcgaaaattgtaaaaactgacgtg
cgagtgaaaccaaaattacgagaaagtaccttgaattttgttagcaaaacgacgaatgat
cgagaggaggcgaaaacagaagtcgcaccaccgcccggttataaaacgacacatgatgaa
gatacggatgataaagatagtcaacgtgaagtagacgatagtattacagtttttgtcagt
aatttagattacacagcgaccgaagacgaagtgagagatgctttaaaaccggctggaccg
ataacgttactcagaatgattagagattataagggacgtagcaaaggatactgctatgta
caattaagtagcgtaggatctgtggaagaagctttaaaattagatagaacacctataaga
ggacgtcctatgtttgtttcaaaatgtgatcctaacaagagtaccagaagttcagcattc
aaataccgttctacacttgaaaagaacaagctttttgttaaaggacttccacttacgctg
acaaaagaggaattggaggagatatttaaagttcacggagatctgaaggaagttcgccta
gttacttaccgtaatggacactcgaagggcttggcttacgttgagtatcacgatgaagca
accgctgcgaaagcccttttaagcacggacggtatgaagattcaggacaaagtgatcaac
gttgcgataagtcaaccgcccgatcgcaagaaacctgaagcggaggagaacggaggacag
gtgaagtcattaggtggaacatcgacgagccgtacagcagtcggcgtgcccaagactttg
ctgtctatggttccccgtagcgttaaaaagaatagcagtaacggcaacgcagctccggat
agaaatacgcagtcgatgagcaatcaggactttaggaacatatttctcaataaaaaaatc
catgtgcttaataacagcgacctttga
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