Temnothorax americanus: 143894977
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Entry
143894977 CDS
T11456
Symbol
L(3)72ab
Name
(RefSeq) U5 small nuclear ribonucleoprotein l(3)72Ab
KO
K12854
pre-mRNA-splicing helicase BRR2 [EC:
5.6.2.6
]
Organism
tame Temnothorax americanus
Pathway
tame03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tame00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
143894977 (L(3)72ab)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tame03041
]
143894977 (L(3)72ab)
Enzymes [BR:
tame01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
143894977 (L(3)72ab)
Spliceosome [BR:
tame03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
143894977 (L(3)72ab)
Complex C
U5 SnRNP specific factors
143894977 (L(3)72ab)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Other DBs
NCBI-GeneID:
143894977
NCBI-ProteinID:
XP_077257824
LinkDB
All DBs
Position
Unknown
AA seq
2133 aa
AA seq
DB search
MADAAARQLQYEYKANSNLVLQADVRLIERRSRDEATGEVMSLVGKLDGTRMGDRAQRTK
PGKAEERKVKRQKRDEAQYDFARMKGATLLSEGVDEMVGIVYRPKTQETRQTYEVLLHFI
QEALSDQPRDILCGAADEVLAVLKNDRLKEKEKKKETELLLGLLAEERFALLVNLGKKIT
DFGSDEKSTTNDENIDETYGINVQFEESSEEDDEDAYGEVRENDDEGDEGEEANDDRAIH
AENLGGTEEMKKEKPLHPLDIDAYWLQRRLSRIYDDAMMSQARAAEVLAVLKDAADDREC
ENQLVLLLGYDCFDFIKQLKKYRHTVAYCTMLASSQSESERQKIRNKMNDDPVLAKILRQ
LDTGKGEDDADETMEARSQRKRREENEDTGGPGGQVQGTRNLIDLEDLIFAQGSHFMANK
RCQLPDGSFRKQRKGYEEVHVPALKPKPFAENEKLHPIEQLPKYVQPAFEGFKTLNRIQS
RLYQTALESDENLLLCAPTGAGKTNVALLCMMREIGKHINADGTINADEFKIIYVAPMRS
LVQEMVGNFRKRLSTYNLTVSELTGDHQLTREQIAATQVIVCTPEKWDIITRKGGEKTFT
SLVRLIIIDEIHLLHDERGPVLEALVARTIRNIETTQEDVRLVGLSATLPNYQDVAAFLR
IKPETGLFYFDNSFRPVALEQQYIGVTEKKALKRFQVMNEIVYEKTMEHAGRNQVLIFVH
SRKETGKTARAIRDMCLEKDTLGQFLREGSASMEVLRTEAEQVKNQELKDLLPYGFAIHH
AGMTRVDRTLVEDLFADRHIQVLVSTATLAWGVNLPAHTVIIKGTQVYNPEKGRWVELGA
LDVLQMLGRAGRPQYDTKGEGILITNHSELQYYLSLLNQQLPIESQLISKMSDMLNAEVV
LGTIQNIRDAVTWLGYTYLYIRMLRCPNLYGISHDKLKQDPLLELHRADLIHSAALGLDR
SGLIKYDRKSGNFQATELGRIASHYYCTHETMSTYNQLLKRTLSEIELFRVFSLSGEFKN
INVREEEKLELQKLMERVPIPVKESIEEPSAKVNVLLQAYISQLKLEGFALMSDMVFVTQ
SASRLMRAIFEIVLFRGWAQLADKCLSICKMIDRRMWQSMSPLRQFRKMPEEIVKKIEKK
NFPWERLYDLGPNEIGELIRVPKLGKTIHKYVHQFPKLGLSTHIQPITRSTLRVVLTITP
DFQWDEKVHGMSEAFWILVEDVDSEVILHHEYFLLKAKYAADEHVIKFFVPVFEPLPPQY
FLRVVSDRWIGAETQLPVSFRHLILPEKNLPPTELLDLQALPITALRNAKFENIYSDFPQ
FNPIQTQVFNAIYNSDDNVFVGAPTGSGKTTIAEFAVLRLLTQNPEGRCVYMVSKEALAE
LVYADWAAKFGQQLGRKVVLLSGETGTDLKLLAKGQIIITTADKWDVLSRRWKQRKNVQN
IQLFIVDELQLIGGEEGPVLEVACSRARYISSQLDKPTRIIALSASLADAKDAAQWLGAP
AAATFNFHPSVRPVPLELHVQGINVTHNASRLAAMAKPVYNAILRHAAHKPVIVFVPTRR
QARLTAIDLLTFTAAEGQPSKFFHAEEADIKPFLDRMTDKTLKETLSQGVAYLHEGLSAD
DRRLVEQLFDSGAIQVAVATRDLCWGLSISSHLVVVMDTQCYNGKTHAYEDYPITDVLQM
VARANRPLEDEDAKCVLLCQSSKKDFFKKFLNEPLPVESHLDRRLHDHFNAEIVTKTIEN
KQDAVDYLTWTFLYRRLTQNPNYYGLQGVTHRHLSDHLSELVESTLTDLEQAKCVAVEDE
MDTLPLNLGMIAAYYYINYATIELFSLSLNNKTKIRGLLEIISAAAEYESVPVRQREENL
LRSLAARLPHAPQAARMADPHVKAQLLLQAHLSRIQLGPELQKDTELVLGKAVRLIQACV
DVLSSSGWLAPAVAAMELAQMVTQAMWSKDSYLKQLPHFTAETIKRCTDKGVETVFDVME
LEDDDRNRLLQLTDAQMADVAKFCNRYPNIEMSYEVQDKDKLHSGGTVNVIVQLEREDEV
IGPVVAPFFPQKREEGWWVVIGDPKSNSLLSIKRLTLQQKAKIKLDFVAPAPGQHSYTLY
FMSDAYLGCDQEYKFTINVGEYESDASSGSDSD
NT seq
6402 nt
NT seq
+upstream
nt +downstream
nt
atggcggatgctgctgcgcgtcaattgcagtacgaatataaagcgaattccaatctcgtt
ttacaagctgacgtccggttaatagaaagacgcagccgagatgaggctaccggcgaggtt
atgtccctcgtgggaaaattggatggtacacgtatgggtgatagggcccagcgtaccaaa
cctgggaaggcggaagagagaaaagtcaaacgtcaaaagcgcgacgaggcgcaatatgac
ttcgcacgtatgaaaggagcaacattattatccgaaggtgtggatgaaatggttggtatt
gtatatcgtccgaaaacacaagagacgcgtcagacttatgaggtattgctccatttcata
caagaagctttgagcgatcagccacgcgatattctttgtggtgcggctgacgaagtacta
gctgtgttgaaaaatgatcggcttaaagagaaagaaaagaaaaaagaaacggagctttta
cttggtttattagcggaagaaagattcgcgctgcttgtaaaccttggtaagaagattacg
gatttcggcagtgacgaaaaaagtacaaccaacgatgagaatattgatgaaacgtatggg
atcaatgtacagtttgaggagagtagcgaagaggacgatgaagatgcgtatggagaagtt
cgagaaaatgatgacgaaggagacgagggtgaagaagccaatgacgatagagctattcat
gcagaaaatttgggtggaacagaagaaatgaagaaagaaaaaccgttgcatccattagat
atagatgcgtattggttgcaaagaagattaagtaggatatatgacgatgctatgatgtca
caagcgagagctgctgaggtactagctgtcttgaaagacgccgcggacgatcgcgaatgc
gagaatcagcttgtacttttattgggctacgactgctttgactttattaaacaacttaaa
aaatacagacatacagttgcgtactgtacaatgttggcctcgtcgcagtctgaatcagaa
aggcaaaagatccgtaacaagatgaacgatgatccggttcttgccaaaatcttacggcaa
ttagatacgggtaaaggcgaagacgacgctgacgagacaatggaagcaagatcgcagcgc
aagaggcgggaagagaatgaagatacgggagggccagggggacaagtacaaggtacaaga
aacttgatagatctggaggatctgatattcgctcagggaagtcactttatggccaacaaa
cgttgccaactaccagacggcagttttcgaaaacagcgaaaaggatacgaagaagttcat
gttcctgctttaaaaccgaagccgtttgcggaaaatgagaaactacatccaattgaacaa
ttgcccaagtatgtgcaacctgcttttgaaggcttcaagacattgaatcgcatacaaagt
cgtttatatcagacggcgttggagagtgacgaaaatctactgctgtgtgctccaacggga
gctggtaaaaccaatgtggcactgctgtgcatgatgcgagaaattggaaagcatataaac
gctgatggtacgatcaatgcagatgagttcaaaataatttatgtcgctccgatgcgttct
ctggtgcaagaaatggtcggaaattttcgcaagcgattgtcaacgtacaatctgactgtc
tccgaattgacgggtgatcatcagttaacacgagagcaaattgccgctactcaggtgata
gtgtgcacgccggaaaaatgggatattataacgagaaagggtggcgagaaaactttcacg
tcattggtacgattgattattattgatgagattcacttgttgcacgacgagagaggtcct
gtcctggaggcgctggtggcaagaacgatacgaaacatcgaaactactcaggaagatgtg
cgtctagtcggcttgtcggccacgttacccaattatcaagatgttgcagcgtttttacgc
attaaaccggaaacgggactgttttatttcgacaacagttttcgtcctgtagctttggaa
cagcaatatatcggcgtcaccgaaaagaaagcattgaaacgtttccaggtgatgaatgag
attgtctacgaaaagaccatggaacacgccggcaggaatcaggtactgatattcgtgcac
tcgcgtaaagaaaccggaaaaacggcacgcgctattcgagacatgtgtctggagaaggat
actttgggtcaatttctcagagaaggttccgcgtcgatggaggttctaagaacagaggcg
gagcaagtgaaaaatcaggagcttaaggatctgctgccatacggttttgcgattcatcac
gccgggatgactcgggtggatcgtaccctggtagaggatctcttcgccgatagacacata
caagttctcgtgtctacagcaactttagcctggggcgtcaatttaccggctcacacggtt
attatcaagggcacccaggtatacaatccggaaaagggtagatgggtcgagctaggcgct
ttagacgtactgcaaatgttaggacgagccggtcggccgcagtacgacaccaaaggcgag
ggcatcctcatcacgaatcatagcgagctacagtattatctgtcgctcttaaatcagcaa
ctacccattgaatcccaattaatcagcaagatgtccgacatgttgaacgcggaggtggtg
ttgggtacgattcaaaatatcagagatgcggttacctggcttggttacacttatctttac
attagaatgcttcgctgcccgaatctatacgggataagtcacgacaagttgaagcaagat
cctttattggagctgcatagagctgatctaatccactcggcggcactcggattggatcgc
agcggcttgatcaagtacgatcgcaagtccggcaattttcaggcgaccgagttgggcaga
atagcgtctcattattattgcactcacgaaacaatgtctacgtacaatcagttgttgaag
cgcacgttgagcgaaatagaattgttccgggtgttctcgctgtcgggcgagttcaaaaat
ataaatgtcagggaggaagagaagttggagctgcagaaactgatggaaagggtgccgata
ccggtgaaggaaagcatcgaggaaccgagcgcgaaagtgaatgtgctattgcaagcgtat
atttcacaactgaaactcgagggattcgctctcatgtccgatatggtattcgtgacgcaa
tccgcctcgcgtctcatgagagctatcttcgagattgttctgttccgcggttgggcacaa
ttggcggacaagtgcctgtctatctgcaagatgatcgatcgcaggatgtggcagtcgatg
tcgcctctcagacaattccgcaagatgccggaggaaattgtgaagaagatcgagaagaaa
aacttcccgtgggagaggttgtatgatttggggcccaacgagatcggcgaattgattcgc
gtgccgaagctaggcaagaccattcacaaatacgtccaccagtttccgaaactgggcctt
tccacgcatatccaaccgatcacgcgttccactctaagagtcgtgctgactatcaccccg
gacttccagtgggacgagaaggttcacggtatgtccgaagcattttggattttagtcgag
gacgtagattcggaggtaatattgcatcacgagtactttttgctcaaggccaaatatgcg
gccgatgaacatgtgataaaattcttcgtgccagtcttcgagcctctgccaccgcagtac
tttttgcgcgtggtgtccgatcggtggatcggcgcggagacgcaattgcccgtaagcttc
cgacatctgatattgcccgagaagaatctaccgcctacggaattgctggatctgcaggcg
ctgccgataacggcgttacgaaatgccaaattcgagaacatctattctgattttccgcag
tttaacccgatccagacacaggtgttcaatgcgatctacaattctgacgataacgtgttc
gttggagcgcccacaggttcaggaaagacgaccatcgcggaatttgcggtactaagatta
ctaacgcagaatccggaaggacgatgcgtatatatggtgagcaaggaagctttagccgaa
ttggtctatgccgattgggcggcaaaattcggccaacagctgggaagaaaagttgtcctg
ctgagcggtgaaacgggaacggatttgaagctcctggccaaaggccagatcattatcacc
acggcggacaaatgggacgtgttatcgcgcaggtggaagcagcggaagaacgtgcagaac
atccagctgtttatcgtggatgagctgcagctgatcggcggtgaggagggcccggtgcta
gaagttgcatgttcgcgagcgcgttatatctcttcgcagctcgacaaacccaccaggata
atagcgttatcggcctcgttagccgacgccaaagacgcggcacagtggttgggagcaccg
gcagcggcaaccttcaattttcatccttctgtgcgaccggtacctttagagctgcacgtg
caaggtataaacgtcacccacaacgcgtcgagattagccgccatggcaaaaccggtgtat
aacgcgattctccggcatgccgcgcacaaaccggtgatcgtatttgtacccactcgtcgg
caggcgagattaacggccatcgacttgctaacattcacggcggccgagggtcaaccctcg
aaattcttccatgcagaagaggctgacattaagccgttcctcgatcgcatgaccgacaaa
acgctaaaggaaactctgtcgcagggtgtggcttaccttcacgagggtttgtcggccgac
gatcgtcgtttagtcgagcaactgttcgacagcggagctatccaagtggcggtcgcgacg
agggatctctgttggggtttatctatcagctcccaccttgtcgtagtcatggacacgcag
tgttacaacggcaagacacacgcttatgaagattatccaatcacggacgtgctgcaaatg
gtggcgcgagctaatcgcccactagaagacgaggacgccaagtgcgtgctactgtgtcaa
agctcgaaaaaagatttcttcaagaagttcctgaacgagccactaccagtggaaagccac
ttggatcgccggctgcacgatcacttcaatgcggagattgtgacgaagacgatcgaaaac
aaacaagacgcggttgactacctcacgtggactttcctgtaccgacgactcactcagaac
cctaattactacggcctgcaaggcgtcacgcatcggcacctatcggatcatctgtccgag
ttggtcgagagtacattgaccgacctagaacaagccaagtgtgtcgccgtagaagacgag
atggatactttgccgctcaatctgggaatgatcgccgcctactattacatcaattacgcc
accatcgaattgttcagtctgtctctcaacaataagacgaagatcaggggtttgttggag
attatttcagcagctgctgagtacgagagcgttccagtgcgacaaagagaagagaattta
ctgagaagtttggctgcgcgtctacctcatgcgccacaagccgctagaatggccgatcct
cacgtgaaagcgcagcttctgctgcaagctcacttgtcgaggatacagctaggtccagaa
ttgcagaaggacaccgaactggtgctgggcaaggccgtgaggctgatacaagcttgcgtc
gacgtgctgagctcttccggatggttggcacccgccgtcgccgctatggaacttgcgcag
atggtgacgcaggcgatgtggtccaaggattcctatttaaagcaactgccgcacttcaca
gcggagaccatcaagcgctgcaccgacaaaggcgtggagaccgtgttcgacgtgatggag
ctcgaggatgacgatcgaaatcggctgttgcagttaacggatgcgcagatggcggacgtg
gcgaaattctgtaaccggtatcctaacattgagatgtcgtatgaggtacaagataaagac
aaattgcacagcggcggcacggtaaacgtgatcgtacaattggaacgggaggacgaggta
attgggccggtagtcgcgccattcttcccgcaaaaacgtgaggaaggctggtgggtggtg
atcggcgacccaaagagcaattccttgctctctatcaagcgcctgacgttacaacagaag
gcaaagatcaaactggatttcgttgctccggcacccggccagcactcctacaccctgtac
ttcatgagcgacgcttatctcggttgcgatcaagaatacaaatttactatcaacgtcgga
gagtacgaatcggatgccagttccggttcggattccgattaa
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integrated database retrieval system
