Temnothorax americanus: 143895038
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Entry
143895038 CDS
T11456
Name
(RefSeq) histone deacetylase HDAC1-like isoform X1
KO
K06067
histone deacetylase 1/2 [EC:
3.5.1.98
]
Organism
tame Temnothorax americanus
Pathway
tame03082
ATP-dependent chromatin remodeling
tame03083
Polycomb repressive complex
tame04213
Longevity regulating pathway - multiple species
tame04330
Notch signaling pathway
tame04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
tame00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
143895038
03083 Polycomb repressive complex
143895038
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
143895038
04350 TGF-beta signaling pathway
143895038
09150 Organismal Systems
09149 Aging
04213 Longevity regulating pathway - multiple species
143895038
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tame03036
]
143895038
Enzymes [BR:
tame01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
143895038
Chromosome and associated proteins [BR:
tame03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class I HDACs
143895038
HDAC complexes
Sin3A-HDAC complex
143895038
BRAF-HDAC complex
143895038
REST complex
143895038
SHIP complex
143895038
MiDAC complex
143895038
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.6)
143895038
Heterochromatin formation proteins
Other heterochromatin formation proteins
143895038
Chromatin remodeling factors
NuRD complex
143895038
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Hist_deacetyl
Motif
Other DBs
NCBI-GeneID:
143895038
NCBI-ProteinID:
XP_077257940
LinkDB
All DBs
Position
Unknown
AA seq
495 aa
AA seq
DB search
MAMQPFKKRVCYYYDSDIGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKATA
EEMTKFHSDDYIRFLRSIRPDNMAEYNKQMQRFNVGEDCPVFDGLYEFCQLSAGGSVAAA
VKLNKQASEICINWGGGLHHAKKSEASGFCYVNDIVLGILELLKYHQRVLYIDIDVHHGD
GVEEAFYTTDRVMTVSFHKYGEYFPGTGDLRDIGAGKGKYYAVNIPLRDGMDDESYESIF
VPIISKVMETFQPSAVVLQCGADSLTGDRLGCFNLTVRGHGKCVEFVKRYNLPFLMVGGG
GYTIRNVSRCWTYETSVALGSEIANELPYNDYFEYFGPDFKLHISPSNMTNQNTPEYLDK
IKTRLFENLRMLPHAPGVQVQAIPEDGAIIDDAEIEEKIKLDERLPQRDLDKRIQRENEY
SDSEDEGEGGRRDNRLYKGSTKRLRLEKSQEMDMRLMNINLKKEDDIKSDVKENEKDEKV
NFMNDETKKEGGMNL
NT seq
1488 nt
NT seq
+upstream
nt +downstream
nt
atggccatgcagccgttcaagaaacgcgtttgctactactatgatagtgatattgggaat
tattattatggccaaggacatcctatgaagccgcatcgtataaggatgacgcacaatcta
ctcttgaactatggtctttacaggaagatggagatatatcgaccacataaagctacagca
gaagaaatgacaaaattccatagtgacgattacatcagatttctcagatcgatacgccca
gacaacatggcagaatacaacaagcaaatgcaacgatttaacgttggagaagactgccct
gttttcgatggcttgtacgaattttgtcaattatctgctggtggatctgtagctgctgct
gtaaagctcaacaagcaagcctcggaaatctgcatcaattggggcggtggcttacatcat
gcaaagaagagcgaagcttctggcttttgttacgtaaatgatattgtgcttggaattttg
gaattgctcaaatatcatcagagagtcttgtacatcgacatcgacgttcatcatggcgat
ggcgtagaggaagctttttacacaacggatagagtgatgacggtctcatttcacaagtac
ggcgagtatttccctggaacgggagatcttcgcgatataggagcaggaaagggaaagtac
tatgcagttaatatacctttaagagatggtatggatgatgaaagctacgaatcaatattc
gttcccatcatctctaaagtgatggagacatttcaaccctccgccgttgttttacagtgt
ggtgcagactccctgacaggcgaccgattaggatgcttcaatttaactgtgaggggtcac
ggcaaatgcgtagagtttgtgaagagatataatttaccttttctgatggtgggaggtggt
ggttataccatcagaaatgtgtccagatgttggacatatgagacatcggtggctctcgga
agtgaaatcgctaacgagcttccatacaacgattactttgaatatttcggccctgatttt
aaactacatattagtccttcaaatatgacaaatcaaaatactcctgaatatctcgacaaa
attaaaacgaggctgtttgaaaacctgagaatgctacctcacgcacctggcgtacaagtt
caggcaataccagaggatggtgccattattgatgatgcggaaattgaagaaaagataaaa
ctcgacgagagactgcctcaacgtgatttagataagaggatacaacgtgagaacgagtac
agcgatagtgaagatgaaggtgaaggtgggcgaagagataacagattgtacaaggggtct
acgaagcgattacgtttggaaaaaagtcaagaaatggatatgcgtcttatgaacattaat
ctaaagaaagaagacgatataaaatcagatgtgaaagaaaatgaaaaggatgagaaagta
aatttcatgaatgacgaaacaaagaaagagggtgggatgaacctctga
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integrated database retrieval system
