Temnothorax americanus: 143895730
Help
Entry
143895730 CDS
T11456
Symbol
Cpsf5
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 5
KO
K14397
cleavage and polyadenylation specificity factor subunit 5
Organism
tame Temnothorax americanus
Pathway
tame03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
tame00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
143895730 (Cpsf5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tame03019
]
143895730 (Cpsf5)
Messenger RNA biogenesis [BR:
tame03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor Im (CFIm)
143895730 (Cpsf5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NUDIX_2
Motif
Other DBs
NCBI-GeneID:
143895730
NCBI-ProteinID:
XP_077259183
LinkDB
All DBs
Position
Unknown
AA seq
228 aa
AA seq
DB search
MAMATNQVKGSGWPRRASNSSFEGKVVQNQSVTINRTVNLYPLTNYTFGTKEPLFEKDPS
VPARFQRMRDEFDKIGMRRSVEGVLLVHEHGLPHVLLLQLGTTFFKLPGGELNTGEDEVE
GLKRLLTETFGRQDGVKQEWVIEDTIGNWWRPNFEPPQYPYVPPHITKPKEHKRLFLVQL
QEKALFAVPKNYKLVAAPLFELYDNSQGYGPIISSLPQSLCRFNFIYM
NT seq
687 nt
NT seq
+upstream
nt +downstream
nt
atggcgatggcgacgaaccaagttaagggtagcggctggccacggcgggcgagcaacagt
tcgttcgaggggaaggtggtgcagaatcagtcggtcaccatcaacaggaccgtcaattta
tatcctttgacaaactatacgtttggaacaaaagagccactcttcgagaaagatccatcg
gtaccagcaaggtttcagcgcatgagagatgaattcgacaagatcggcatgcggagaagc
gtagaaggcgtcttactggtacacgagcatggactgccacacgttcttcttctgcaactc
ggcacaacattcttcaaattacctggcggagaactcaatacaggagaagatgaggtagag
ggcctaaaacggctccttacagagactttcggacggcaggacggggtgaagcaggaatgg
gttatagaggacaccattggaaattggtggcgtccaaactttgaaccacctcagtatccg
tacgtgccgccacacatcacaaaaccgaaagaacataagagactatttctcgtacaacta
caagagaaagctctctttgctgtaccgaagaactacaagttagtcgctgcaccattattc
gaattgtatgacaattcgcaaggttacggtcccataatctcatctttgccacaatctttg
tgcaggtttaatttcatctatatgtga
DBGET
integrated database retrieval system
