Temnothorax americanus: 143896531
Help
Entry
143896531 CDS
T11456
Name
(RefSeq) uncharacterized protein LOC143896531 isoform X1
KO
K14296
nuclear pore complex protein Nup153
Organism
tame Temnothorax americanus
Pathway
tame03013
Nucleocytoplasmic transport
tame03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
tame00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
143896531
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
143896531
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tame03019
]
143896531
Messenger RNA biogenesis [BR:
tame03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
143896531
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Zn_ribbon_RanBP
Motif
Other DBs
NCBI-GeneID:
143896531
NCBI-ProteinID:
XP_077260564
LinkDB
All DBs
Position
Unknown
AA seq
1597 aa
AA seq
DB search
MTTAAAGRAPFARPFVVTRVARRSDRRRAPTPRRMVSRMPALSPRRGPPTRYPRCHGYSF
VRKVATKVTDFIPQSSWISKWFNTSQDNEGTLEGRGNSEETELEDDVQQPPIKRARIRMD
VTHPPGTFSIKTRVKTALNTVKPSKEQYPVHSEMTEDFLEPATAGPSGIGRLISLTPAVS
ADIRTVTSHRSDLNSLASSTNNGIANGMDDNSESSESTSGCSSLIPQINRHEGPSNLLYN
STFTSRKRHVDDKLTFTNHLQSPRSLFLDSNSRDTLSSRRPSFNASIITNTADRASSLSS
PFYSGNITFGGANAASLYKRSRNIFNNSNEIQLKVPRRTNVEVQPSDMEVDSSGMSQTAK
KILEALEHFSSPISDAKKIPLKNTNNAVSTVMNRKRAREEVASPTARIGLRHLTRELTVP
TVPDILKLRRRQKLQDTTLMARKIVSARSDPPPSRQEYQLRAEDADSEKYRGKLKGKSKV
NLEQQETVAPVNLPNIPLPITTLPNFNFTLPLPPSYSAGKTVANKENTFTFASPIKVTEA
EKSLQSVDNFTFSNPIIAEDGANNTTDPNSRSTTENEFTVDYAITSIPNSFPNFIWAGSS
TAPRLKAKVKNGKNDSVGSAVSKELKSGSVMDALFQKSNKIVSNLIGQLNPGLASETTHT
DKTASTSVGSDSDVANTYGTESSWECSECMIRNNSTDKHCTACKTSRSNPNEKTSLPSTS
TTDTTVVEPKPVAQDCFGSQFKLSTNQWECAACCVRNKQSDATCVACATPKPGSSSTIQK
TVKSQNSDLMEKFKPAEGSWQCSGCLLRNSANVITCVCCNTSKPMTSVKTKSKKTDNVTE
SSAQKLNTSTEVTATQKTSNNSEIMSKFKPSKDSWECSGCFVRNNNSVTTCPCCSTSKPN
STGGPSKAEQTSSNGFGDKFKKPEGAWTCDSCLVQNDAKHTECVACQASKPGTVKSNESS
SNTNSTLQFKFGVSSTQPGGFKFGLNKVDDQSKPDASSLNGFKFGNLQQNSGMTQFTFGI
PKEQNKAVSEASKTNSVTTSSSSTGFLFNVKSPEKPESTSQNQETKQETLFGTPKSDGST
AASEKQNTSIMSSAPSTASPFTFGVQKPEFTQPASNKETQKTSFVTNVTESSKPAAATTD
AAPVSTNPMLSSLLTQKNTTKSILNAKPESTFSFGVPSGISAATTTSTNATTTCLPTFAQ
PTFTFSDTKTSSQLATIPSFGQVPMSSAACVLSTSGGSKTTETTPSTKAANNTPVAPLFP
IVSSATPLFNESKATIAFGTDKPSSFAATGSKLPVLPGFAMLENKIPTFGGNTESKPVIF
GTSETKLPVFNSPPPAATPLPTFDTLSNKTTSSPFGSSNASAFGNTTTPAFGGVTTTPTI
FSTTKPGETNAPNSSLFTFGSASSQQSASSGFNFSTNVNPPPPASSAKPLFTFGSSSSTP
SNVCSNNTFGGGTFGANSAPTNTANFTFNPPKQETPAAFGQGAVATPIFGAPQTNPQTQV
TSSFSSTPSSSTGFNFGSTAPVAATSGSFNFGGMPSTSATPGAFNFNSPASAPAFDPNSR
PLYNFTKGSAPPIFTAPPQSAAPAPRKIKKAFRRCVR
NT seq
4794 nt
NT seq
+upstream
nt +downstream
nt
atgacgacggcggcggcgggccgcgcgcccttcgcgcgccccttcgtggtcaccagggtg
gcacggcgatcggaccgacgtcgagcgccgactcctcgccgcatggtgtcccgcatgccc
gccctttccccacgacgaggcccccccacgcgatacccacggtgtcacggttattcattt
gtgagaaaagtagcaaccaaggtgacagattttataccacaatcatcgtggatcagtaag
tggttcaatacctctcaagataatgagggtacgttagaaggtagagggaatagtgaggaa
acggaactcgaggatgatgtgcagcagcctccaattaagcgagcgcgcattcgtatggat
gtgactcatccacctggcacgttttctataaaaacgagagttaaaaccgcattgaatacg
gttaagccctctaaagagcagtatcccgttcatagtgaaatgacggaagattttctggaa
cctgcaacagctggaccaagcggaataggccgtttaatatctttgactcctgcagtatca
gcagacattaggactgtaacgtctcacaggtctgacttaaattcgttagcttcgtcgact
aataatggaatagcaaatgggatggatgacaattcggagtccagtgaaagtaccagtgga
tgcagttcgcttattccacagataaataggcacgaaggcccatcaaacttgttgtataat
tcgacgtttaccagtagaaagagacatgttgatgataaattgacatttactaatcattta
caatctccaaggtccttgtttctagacagtaattctcgcgatactttaagcagtcgtaga
ccgagttttaacgcatcaattataacaaacactgcagatcgtgcatcttcgctatcctct
cctttttatagtggtaatattacttttggaggtgcaaatgcagcaagtctttataaacga
agtcgtaatatttttaacaattcaaacgagatacaacttaaagtaccaaggaggacaaat
gttgaagttcaaccttctgatatggaagttgattcatcggggatgagtcagaccgccaaa
aagatattggaagcattagaacatttctcgtcacctatatccgacgcgaagaaaattccg
ttgaaaaacacgaataacgctgtgtctacggtaatgaacaggaagagagcgcgagaagag
gtggcaagtccaaccgctagaattggtttgcgccatttgacgcgtgaattaacagtacca
accgtccccgatatattgaagttaagacgaagacaaaaattacaagatacaactcttatg
gctagaaaaatcgtttccgctcgtagcgatccaccgccttctcgacaggagtaccagttg
agagcggaggatgccgatagtgaaaagtatcgcggcaagttaaagggcaaatctaaagta
aatctagaacaacaagaaacggtagcgcctgtaaatttgccgaacatacctctgccaatt
acaacattacccaatttcaattttaccctaccacttcctccttcatattccgcaggcaaa
actgtggcaaataaggaaaatacttttacatttgctagccctattaaggtgacagaagct
gagaagagtttgcagtctgtcgacaatttcacttttagtaatccgatcatcgctgaagac
ggcgcgaataatacgactgatccgaattcacgttcaactacagagaacgaatttactgtt
gattacgcgatcacatctataccgaattcatttcccaattttatttgggctggctcatct
acagcgcccagattaaaagcgaaggtaaagaacggcaagaatgattccgtcggatctgcg
gtgtcgaaggaactgaaatctggaagtgttatggatgcattgttccaaaaatctaacaaa
atcgtatctaatttaatcggacagttaaacccgggattggcttctgaaacgacacacact
gacaagactgctagtacatccgtcggctcggattctgatgttgcaaacacgtatggtaca
gagtcgtcttgggagtgtagtgaatgtatgatcaggaacaacagtacggataaacactgc
actgcgtgtaagacttctcggtccaatcctaatgagaaaacttcgttgccctcaacgtca
acaacagatacgacagtcgtggaaccaaagccagtcgcacaggattgcttcggttctcaa
tttaaactatctacgaatcaatgggaatgtgcagcttgctgtgtaagaaacaagcagagt
gatgccacatgtgtagcgtgcgctacaccaaaaccgggaagtagttcgacgattcaaaaa
actgttaaatctcaaaattctgatttaatggagaagtttaaacctgccgaaggatcgtgg
caatgctccggttgcttactcagaaactccgcgaacgttattacgtgtgtttgttgcaat
acatctaaacctatgacctctgtaaaaacaaaatcgaagaagacggataatgttacggag
tcgtctgcgcaaaagttaaatactagtacagaagtcacggcaacgcagaaaacgtctaat
aattctgaaataatgagcaaatttaaaccaagcaaagattcctgggaatgttcaggatgt
tttgttagaaataacaattccgttaccacctgcccttgctgcagcacttctaaacctaat
tccactggtgggccgagcaaagcggaacagacgtcgagtaatgggttcggagacaaattt
aaaaaaccagagggtgcgtggacttgcgattcttgcttggtacaaaatgacgctaagcat
acggaatgtgtggcttgtcaagcttcaaagcctggtactgtaaaatcaaacgaatcttca
tcgaacactaactctaccttgcaatttaaatttggcgtatcatctacccaaccgggtgga
tttaagtttggtctgaataaggtcgacgatcaatctaaacccgatgcatcttctctaaat
ggattcaaatttggtaatctacaacagaatagtggcatgacacaatttacgtttggtatt
ccaaaggaacagaacaaagctgtaagtgaagcatctaaaaccaatagtgtcacaacgtct
tctagtagtacaggatttctattcaatgtaaaaagtcctgaaaaacccgaatctaccagt
cagaatcaggaaaccaaacaagaaacacttttcggtacgccgaaaagtgatggttcaaca
gcagcaagtgaaaaacagaatacaagcattatgtccagcgctccatcgaccgcttctcct
ttcacctttggtgtacagaaaccagaatttactcagcctgcttcaaataaggaaacgcaa
aagacttcctttgtaaccaatgtgacagaaagttccaagccagcagcagcaacaactgat
gcagcaccagtcagcactaatccaatgttatcgtcgttactgacccaaaaaaatactacg
aagagtatattaaacgcaaaaccggagtcgacgttttcattcggggtaccaagcggtata
agcgctgccactacaacttccacgaatgcaacgactacttgtcttccaacttttgctcaa
cctactttcacattttccgacacaaagacgtcatctcagttagctacaataccgtctttc
ggtcaggttccgatgtcgtctgccgcgtgcgtattatccacgagcggaggaagcaagaca
accgagactactccgtcaaccaaagccgcgaataatacaccggtcgctccgctcttcccg
atcgtctcgagtgccacaccgctattcaacgagtcgaaggcgacgatagcattcggcacg
gacaaaccgtcgtcgttcgccgcaacgggcagcaagctgccagttttgccaggatttgcc
atgctcgaaaacaaaattccaacgttcggcggtaataccgagagtaaaccagtgattttc
ggtacgtcggaaacgaagttgcccgtattcaattcaccaccgcctgcggcaactcctcta
ccaacgttcgacacactgtccaacaagactacttcgtcgcccttcggatcgtctaatgcc
tcggcttttggaaacactaccacacccgctttcggaggtgttacgacaacacctactata
ttctcaaccacgaagccgggcgagactaatgcgccgaactcgtcgttgttcacgtttggt
tcggcttcgtcgcaacaatcggcaagcagcggatttaacttctctacgaatgttaatcca
ccaccgcccgcgtcgtctgcgaagccgctcttcacgtttggtagcagttcgagtacaccg
tcgaatgtatgcagtaacaatacattcggtggcggtacatttggagctaactccgctcca
acgaacactgccaatttcacgttcaatccacctaaacaagaaacaccggcggcgttcggt
caaggtgcagtggcaactccgatattcggtgccccacagacaaatccgcagactcaagta
acgtcatcgttttcgtctacaccttcgtccagtacaggattcaactttggatccacagct
ccagttgctgcgacatcaggaagtttcaactttggaggaatgccatctacatctgcgaca
cccggagcattcaactttaattctcctgcttctgctcccgctttcgatcctaatagtcgg
cctttgtacaacttcaccaaaggaagtgcaccaccaatatttactgctccacctcaatcg
gcggccccagcaccacggaaaatcaaaaaagcatttcgaagatgcgtgcgttag
DBGET
integrated database retrieval system
