Temnothorax americanus: 143896986
Help
Entry
143896986 CDS
T11456
Symbol
Dnalig1
Name
(RefSeq) DNA ligase 1 isoform X1
KO
K10747
DNA ligase 1 [EC:
6.5.1.1
6.5.1.6
6.5.1.7
]
Organism
tame Temnothorax americanus
Pathway
tame03030
DNA replication
tame03410
Base excision repair
tame03420
Nucleotide excision repair
tame03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
tame00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
143896986 (Dnalig1)
03410 Base excision repair
143896986 (Dnalig1)
03420 Nucleotide excision repair
143896986 (Dnalig1)
03430 Mismatch repair
143896986 (Dnalig1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tame03032
]
143896986 (Dnalig1)
03400 DNA repair and recombination proteins [BR:
tame03400
]
143896986 (Dnalig1)
Enzymes [BR:
tame01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
143896986 (Dnalig1)
6.5.1.6 DNA ligase (ATP or NAD+)
143896986 (Dnalig1)
6.5.1.7 DNA ligase (ATP, ADP or GTP)
143896986 (Dnalig1)
DNA replication proteins [BR:
tame03032
]
Eukaryotic type
DNA Replication Elongation Factors
Other elongation factors
143896986 (Dnalig1)
Prokaryotic type
Elongation factors (archaeal)
Other elongation factors
143896986 (Dnalig1)
DNA repair and recombination proteins [BR:
tame03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
143896986 (Dnalig1)
NER (nucleotide excision repair)
Other NER factors
143896986 (Dnalig1)
MMR (mismatch excision repair)
Other MMR factors
143896986 (Dnalig1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_N
DNA_ligase_A_C
mRNA_cap_enzyme
Motif
Other DBs
NCBI-GeneID:
143896986
NCBI-ProteinID:
XP_077261366
LinkDB
All DBs
Position
Unknown
AA seq
978 aa
AA seq
DB search
MLKILAKCSRLSSLALPARRLELAVAAHSRFVVVFNWIHTTNSHNSSDKQENQDAVENGK
RKRDSSNSSSSASPSKKQNIKLKKPKKITKTPSSGVKPRAKLGATPNKLNKLSPGSSKKT
EKKQKDTPGGKKKKKEEDETVNGTIEEKTSDTVEEKTNNAQIGNGAAEGKRKTEESASSK
KESESNTADKVKKTENVKKKRARIIEPVDSSDDEDHLSLPESPKRSEVNDEEKKIENEDK
PSEINNVSNNDTDKSASDSKEKSESPKKSSTPEKSQTTTTTKDESPKKEPTPEKKAKKVP
NFFMSKQKGDAKDDKASNRKSVCQSYNPSASAYHPIDDACWKRGDKTPYSAFARTLELIE
ETSGRLKAIEILSNYFRSVIVLSPADLLPSVYLCLNQLAPAYEGIEFGVADQNLMKAVAQ
CTGRTLAQIKADVQEVGDLGIVAENSRSNQRTMFQPPPLTVSNVYSKLKEIAQMTGPTSL
TKKLDKIQTLFVACCNAEAKYFIRSLAGKLRIGLAEQSVLQALALACAMTPPEQDYPPEI
LNASKKMSSDRFKEKYDEIALTLKTTYCECPNYNLIIPVLLEDGIKALPSKCKLTPGIPL
KPMLAHPTKGVQEVLTRFEGLKFTCEWKYDGERAQIHVADNGQVNIYSRNQENNTTKYPD
IIKRFENTRGDQVKNCILDCEAVAWDREEKQILPFQILSTRKRKDANEEDIKVQVCVFMF
DLLYLNDEPLVKETFAKRRELLKEHFKEVEGEWKFANSLDTTTMEEVEVFLDESVKGNCE
GLMVKTLEKEATYEIAKRSRNWLKLKKDYLDGLGDTLDVVVIGGYIGKGKRTGTYGGFLL
ACYDQENEEYQSICKIGTGFKEEDLENYTKFFKDHVIPQVKSYYRFDSSHEPDHWFEPIQ
VWEIKCADISLSPVHRAAIGIVDPEKGLSLRFPRFIRIREDKSCEQATSAQDVADMYNNQ
EQIKNKTSASKTAEEDFY
NT seq
2937 nt
NT seq
+upstream
nt +downstream
nt
atgctaaaaatcctcgccaagtgctcacgcttgagctcgctggctctaccggctcgacgg
ctggagcttgcagtcgcagctcacagccgattcgttgtcgtttttaattggatacataca
accaacagtcacaactcgtcggacaagcaggagaatcaggatgcagtggagaatggcaaa
cggaagagggatagcagcaacagctccagcagtgcttcaccttcaaagaagcagaacatt
aaacttaagaagccgaagaagattaccaagactccttcgtcaggtgtgaagcctcgtgcg
aagctaggagctactccgaataagctgaataaactttcacccgggtcgtcgaaaaagaca
gaaaagaagcagaaagatacgcctggtggaaagaagaaaaagaaggaagaagatgaaact
gtaaatggcactatagaagaaaagaccagtgacactgtagaagagaagaccaataacgct
caaataggaaatggtgcagctgaaggtaaaaggaaaacggaagaatctgcttcttcaaag
aaggaatctgagtccaatacggcagataaggtaaagaagactgaaaacgtgaagaagaaa
cgggccaggatcattgagccagtggattccagtgacgatgaggatcatctatctttacct
gaaagtccaaaaagatcggaggttaacgatgaagaaaagaaaattgaaaacgaagacaag
cctagcgagataaataacgtttcaaataacgacacagacaaaagtgcttcggacagtaaa
gagaagagtgaaagtccgaagaagtcctccacacctgaaaagtcacaaactactactact
actaaggatgaaagcccgaagaaggagcctacgcctgagaaaaaggctaagaaagtgccc
aatttttttatgtccaaacaaaagggcgacgcaaaagatgacaaagcgagcaatagaaaa
agcgtctgccagtcatacaatcctagcgcatctgcctatcatccgatagacgatgcatgc
tggaaacgaggagacaaaactccatatagcgccttcgcacgcactttggagcttatcgag
gagacgagcggaaggttaaaggcaatagagatattgtcaaattatttccggtctgtcata
gtcctgagccctgcggatcttctaccgagcgtttatctgtgccttaatcaattagcaccg
gcgtacgaaggaattgagtttggagtcgcagatcagaatctaatgaaagccgtagcgcag
tgtactggtagaacgctggcgcaaattaaagccgacgtccaggaggttggcgatttggga
attgtcgcggaaaatagcagatctaatcagagaaccatgtttcaaccgccaccattgaca
gtttctaacgtgtactccaaactgaaggaaatcgctcagatgacggggcccacgtctttg
acgaaaaagttggataagattcagacgctgtttgtggcgtgttgtaatgcagaagcaaaa
tacttcattagatcgttggctgggaagcttcgtattggattagcagaacaatctgttttg
caagcattggctttagcttgcgcgatgacaccgccggaacaagattatccacccgaaatt
ctgaatgcaagtaaaaagatgtcgagcgatcgtttcaaagaaaagtatgacgagatagcg
cttacattgaaaacaacgtattgtgaatgtccgaattacaatcttataattcctgttcta
ctggaggatggaattaaggctttaccgagcaagtgcaaacttactcctggaatacctttg
aaacccatgttggcgcatcctactaaaggtgttcaggaagtcctgacgcgattcgaaggc
ctgaaatttacttgtgaatggaagtacgatggagaaagagcacagatacacgtcgcggac
aatggacaagtcaatatatacagtagaaatcaggaaaacaatacaaccaagtatccagat
atcattaagcgattcgaaaatactcgcggcgatcaagtaaagaattgcatactcgactgc
gaggcggttgcttgggatagggaggagaaacaaatattaccgttccaaatactcagtaca
agaaagcgaaaggatgctaatgaggaggatatcaaagtacaagtatgcgtgtttatgttc
gatctgttatacttaaatgatgagccgttggtgaaagaaacgttcgcgaaacgtcgtgaa
ctgctgaaggagcacttcaaggaagtggagggcgaatggaaattcgccaatagcctggat
actacgacgatggaagaggtggaagtcttcttggacgaatctgtgaagggaaattgcgaa
ggcctgatggtgaagacgttggaaaaggaagcaacctacgagatcgcgaagcgatcaaga
aactggttgaaactcaaaaaagattacttggatggcctcggcgatacgcttgacgtggtc
gtaatcggtggctacatcggcaagggaaagaggaccggcacttatggtggttttctctta
gcttgttacgatcaggaaaacgaagagtatcaaagcatctgtaagatcggcacaggattc
aaagaggaggaccttgaaaattacaccaaattcttcaaagatcacgtaataccgcaggtg
aaatcgtactatcgcttcgatagtagccacgagccggatcactggttcgagccaattcaa
gtctgggagatcaagtgtgccgacatcagcctcagtcccgtacacagagcggctatcgga
atagtcgatccggaaaagggactatctttaaggtttccgcgatttataaggattcgtgag
gataagtcctgcgagcaggctacttccgctcaagatgtggcggacatgtacaacaatcaa
gagcagattaaaaataaaacttcagcatcgaaaaccgcggaggaagatttctattaa
DBGET
integrated database retrieval system
