Temnothorax americanus: 143897857
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Entry
143897857 CDS
T11456
Symbol
Dor
Name
(RefSeq) vacuolar protein sorting-associated protein 18 dor isoform X1
KO
K20181
vacuolar protein sorting-associated protein 18
Organism
tame Temnothorax americanus
Pathway
tame04140
Autophagy - animal
tame04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
tame00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
143897857 (Dor)
04148 Efferocytosis
143897857 (Dor)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tame04131
]
143897857 (Dor)
Membrane trafficking [BR:
tame04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
143897857 (Dor)
Hops complex
143897857 (Dor)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pep3_Vps18
VPS18_RING_C
Clathrin
TPR_Vps41
zf-C3HC4_2
zf-RING_5
zf-RING_11
zf_RING_Vps8
zf-C3H2C3
zf-RING_2
zf-C3HC4
zf_RING_Vps8_fungal
zf-RING_Vps41
zf-RING_UBOX
zf-rbx1
COMP
Laminin_I
zf-RING_16
Motif
Other DBs
NCBI-GeneID:
143897857
NCBI-ProteinID:
XP_077262922
LinkDB
All DBs
Position
Unknown
AA seq
1016 aa
AA seq
DB search
MCVIYLEIESIYSAIKMTSMFDQYEQASQRSKQVPAPPIRPDISTAGFIQMKLQDDGPIF
TKQKVNFLPSDKILYLAVSSNTIVIAMANNILLRIDMKQPDKTEEIDISKYALSMKISGL
FLDPLGHHLLITLVPRHGDNPPPELFYLHRKTAKLKQAGKFKGHEITAVGWNFSNASETS
SGPILLGTSKGLIFETEIGLENDKIFNTSLEQYWRQLPNYLPLYGSKEAGGLVFDIGKNS
KPPITGIEFHKIPNSDKYVIIVTTLMRIYQYIGAVGNPEEKPLLQQVFYRYLNAQETFNE
VINSLPYSKMQFYYPSLGVLPKSFGWLTEAGILYAQVDAKPDAKYVLVNQRMLTCPETSL
MGSNVPQTTSVPLFFVLTEFHALLLYPDHVKGISLLNQELIFEDVYNDAVGKLIGITKDP
ATRSIWAYSERAVFKYKVTKEDRNVWQVYVDKGEFELAKQYCRDNPAHIDQVLVKQAEML
FKNKEYEKSALIYADTHSSFEEVSLKFLQEWQIEALKTFLRKKLDGLKTQDKTQITMIVI
WVTELFMNQMGALRSSNTSYLHDSRYTELQKQFDSFLTIPKVEECIRRNRSTIYDLMASH
GDKDNLICLTIMHCNYEEVIRQHLYKNNYLEALGVLKSQNNKDLFYQFAGILLQELPRPT
VAVLISQGSSLKPAKLLPALVSCNSDEKHAKEIIKYLEFCVYKQGSQEQAIHNFLLSLYA
RYKQGEVMRYISSQGQDISMVHYDVHYALRLCQEVGLTEACVQLSALLGLWTTAVDLALT
ISVDLAKQIAAMPSDHDDELRKKLWLKIAEHVVREKNDIQQAMEFLQHCDLVRIEDILPF
FSDFVTIDHFKEAICNSLQEYNQHIQDLKEEMQEATKAAELIRKDIQAFRTRCTFVHARD
TCNTCEVQLLLRPFYVFPCGHKFHSDCLVAALTPMLSMDQRTKLADLQRQLTAISNRPED
TTSTISVSLSTRDQIKADIDELVASECLYCGELMIESIDKPFIEEEDYERVMKEWT
NT seq
3051 nt
NT seq
+upstream
nt +downstream
nt
atgtgtgttatttacctcgagatagaatcgatttactcagcgatcaagatgacgtcgatg
tttgaccagtacgagcaagcttctcagcgttccaagcaagtgccggcaccgccaattcgt
cctgatatcagcacggctggatttattcaaatgaagctgcaagatgacgggcccatattc
actaagcagaaggttaactttctgccgtcagataaaattctatacttagctgtcagcagt
aacacaattgtgattgctatggctaacaacattttgctacgcatcgacatgaaacaacct
gacaaaactgaagaaatcgacatatccaagtatgcgttgagcatgaaaatatccggcttg
tttttggaccctttgggtcatcacctgctgataactttggtgccgagacacggggacaac
ccgccgccggaattattctacttgcataggaagacggcgaagctcaagcaagctggcaag
ttcaagggtcacgagatcaccgcggtgggctggaacttttctaatgcttcggaaacgagc
tcgggtcccattctactaggcacttccaagggcctgattttcgaaacggagatcggcttg
gagaacgacaagatttttaacacgagtttggagcagtactggcgtcagcttccgaattat
ctgcctctttatggttcaaaagaggcgggaggattggtgtttgacattggaaagaatagc
aagcctccgatcactggaatagaatttcacaaaattcctaattcggataaatatgtgatt
atcgtgaccacccttatgcgcatttaccagtacattggtgccgttggcaatcccgaagag
aagcctcttttgcaacaagtattctatagatatctaaacgcgcaagagacctttaacgaa
gtaataaattctttgccatattcgaagatgcaattttactatccatccctaggcgtcctg
ccaaagtcatttggatggctgacggaagctggtatcctgtatgctcaggtggacgcgaaa
ccggacgcgaaatacgtactggtgaatcaacggatgttgacgtgcccggaaacaagtctc
atgggtagtaacgttccgcaaaccacttcggtgccgttgttctttgtgctgacggaattc
cacgcgttgctgttgtatccggatcacgtgaagggcatatcgctcctaaatcaggaattg
atattcgaagacgtttacaatgacgcagtcggcaaattaattggcatcaccaaggatccg
gcaacgaggtcgatttgggcttatagcgagcgagctgttttcaagtacaaagtaacgaag
gaagataggaacgtttggcaggtatacgtcgataagggtgagtttgaactggctaagcag
tattgcagagacaacccggcgcacatcgatcaagtgctcgtgaaacaggcggaaatgctc
ttcaagaataaagaatacgagaagagcgcgctaatatacgctgatactcactcgtctttc
gaggaggtctccttgaagtttctgcaggagtggcaaattgaagccctgaaaacgtttctg
cgcaagaaactcgacggtttgaagacgcaagacaagacacagataacaatgattgtcatt
tgggtgacggaactgtttatgaatcaaatgggagctctgcgcagcagcaacacgtcctac
ctccacgattcgcggtacacggaattgcagaagcagtttgacagctttctcaccattccc
aaagtcgaggaatgtatcaggagaaaccgtagcacgatatacgacttgatggccagtcac
ggtgataaagacaatctgatatgtctgacaataatgcactgcaactacgaggaggtgatt
cgtcagcacctgtacaagaataactacttggaggcactcggggtactcaagagtcaaaac
aataaggacctcttctatcaattcgccgggatattattacaagagctgccacggcccacg
gtggccgttttgatctcgcaaggatcgtcactgaagccggcgaagcttctgccagctttg
gtctcgtgcaacagtgacgaaaagcacgcaaaagaaattattaaatatttggagttttgc
gtgtacaagcagggctcgcaggagcaagcaattcacaacttccttctatccttgtatgcg
cgttacaagcagggcgaagtgatgcgatatataagctctcaaggtcaggatatcagcatg
gtgcactatgacgtgcattacgcgttgcgtttgtgtcaggaggtaggcttgacggaagcc
tgcgtgcaattgtcggctttgctcggtctctggaccaccgccgtggatctcgcgctcacg
atcagcgtagatctcgctaagcaaatcgccgctatgccatctgatcatgatgacgagttg
aggaagaaactatggttgaagatagcggagcacgtggtgcgagaaaaaaatgacatacag
caagcaatggagtttttgcaacactgcgatttagttaggatagaagatattctgcccttt
ttctctgatttcgtcacgatcgatcatttcaaggaagctatttgcaattccctgcaggaa
tataaccagcatattcaagatcttaaggaagagatgcaggaagccacaaaagcagcagaa
ctaatacggaaggacattcaagccttcagaaccagatgcaccttcgtgcatgcgcgggac
acgtgtaatacatgcgaggtgcaactgttgctgagacccttctacgtatttccctgcggt
cataaatttcacagtgactgtttagtagcggcgttaacgccgatgctgtctatggaccag
aggacgaaactggcggatcttcagcgacaactcacggctatctcgaaccggcccgaagac
acgacttcgacgatctccgtgtcgttgtcgacgagggaccaaatcaaggccgatatcgac
gagctggtcgcctcggaatgcctctactgcggagagcttatgatagaatcgatagacaag
ccatttattgaggaagaggattacgaacgcgtgatgaaggaatggacgtga
DBGET
integrated database retrieval system
