Temnothorax americanus: 143897863
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Entry
143897863 CDS
T11456
Symbol
Pnpase
Name
(RefSeq) polyribonucleotide nucleotidyltransferase 1 isoform X1
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
tame Temnothorax americanus
Pathway
tame03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tame00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
143897863 (Pnpase)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tame03019
]
143897863 (Pnpase)
03016 Transfer RNA biogenesis [BR:
tame03016
]
143897863 (Pnpase)
Enzymes [BR:
tame01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
143897863 (Pnpase)
Messenger RNA biogenesis [BR:
tame03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
143897863 (Pnpase)
Transfer RNA biogenesis [BR:
tame03016
]
Prokaryotic type
tRNA degradation factors
143897863 (Pnpase)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
PNPase
KH_1
S1
BK_channel_a
DUF3855
DUF1840
Motif
Other DBs
NCBI-GeneID:
143897863
NCBI-ProteinID:
XP_077262936
LinkDB
All DBs
Position
Unknown
AA seq
784 aa
AA seq
DB search
MVYIHIHVRVRASKMLAFTSFRLSRYRRSVVLPCKNLCENGNVCYVKFSSASNKNVGTET
VTLSDGKQLHFSTGKYARFADGCAVTTLGDTSVMVTAVCQNQSSTSSFLPLVVDYRQKAA
AAGRIPTNFLRRELGPSEHEILTSRVIDRSIRPLFPEGFYFNTQIMCNMLAIDGTNDPDV
IAINGASAALSVSDIPWNGPVGAVRLGMIDNEMIINPTRRQIQDGILNLIITATKQNLII
MLEGSANEILEQHLKKAIKLGVKECQGIVTAITNLQKTCGKTKREIETNEQRQDDNPKGT
VKELSEAKLRDIFTNHTYDKISRDNAVNDLRNSVIETLRKDNADLDVKLAEKNFGKIVRD
VFRTLILEKDVRCDGRSMDGLRDISCQVDLFNPLHGSAVFQRGQTQVMCTVTLDSLESAL
KMDAISMLISGVKEKNFFLHYEFPPYATNETGNVSRVGRRELGHGALAEKALRPVLPKDY
PFTIRLTSEVLESNGSSSMATVCGGSLALLDAGIPISSATAGVAIGLVTKCNETNMNIEE
YKILTDILGIEDYLGDMDFKIAGTKRGFTALQADVKIPGVPLKIMMECIHQATNAKLEII
KIMNNVIRAPRQTRKDKMPVVDNLEVPIHQRGKFLGVGGMNLKKIFLETGVHIYPHDENT
YSIFAPNEDAMAEAKEMIDDILRKDREPTLEFGAIYTARIVEIRETGVMVTLYSNMVPAL
LPNSQLDQRKIHHPSALGLEVGQEIQVKYFGRDPVSGQIRISRKVLQTPTLIPKTLHRDD
AEKT
NT seq
2355 nt
NT seq
+upstream
nt +downstream
nt
atggtctatattcacattcacgtgcgtgtgcgtgcgtcaaagatgctagcgtttacgagt
tttaggttatcgagataccggagatcagtagttttgccatgtaaaaatttgtgtgaaaat
ggaaatgtttgttacgttaagtttagtagcgcaagtaacaagaatgtcggcacggagact
gtcacgttgtctgacggcaagcaactccacttctctacgggcaaatatgcacgtttcgcc
gatggttgcgcagttacgactctgggagacacttctgtcatggtcaccgcagtctgtcag
aaccagtcgtctacctcttcgttcctgccactcgtcgtggactatagacagaaagcggcg
gcggccggtcgtataccaactaactttctacgaagggaacttggaccgagcgagcacgaa
attcttacgagcagagtcattgatcggtccataaggccattatttccagaaggcttctac
tttaacacccagataatgtgcaacatgttagctatcgacggcacgaacgatccagatgtg
attgccattaatggcgcctccgcggctctcagcgtttccgatattccatggaatggtcct
gtgggcgctgttagactcggaatgatcgacaatgaaatgataatcaatcctaccagacgt
caaattcaggacggtatattgaacctcattatcaccgcgactaagcaaaatctaatcatc
atgttagaaggctcggccaatgagatattggagcaacatttaaagaaggcgataaagctt
ggcgtcaaggaatgccagggcattgtaacggcgattacgaatttgcaaaagacgtgcggt
aaaacgaaaagagagattgaaactaatgaacaacggcaagacgataatccgaagggtacc
gtgaaagaactctcggaggcaaaattgcgagatatatttacaaatcatacgtacgataag
atatcgagagataacgcagttaatgatcttagaaatagcgttatcgaaacattgcgaaag
gataacgcggatttggatgttaagttagcggaaaaaaactttggaaaaattgtcagagat
gtatttaggacgttgattttagagaaggatgtcaggtgcgatggtcgctcgatggatggt
ctacgcgatatatcgtgtcaagtagatctcttcaatcctcttcatggttcagctgtgttt
caaagaggtcaaacccaggtcatgtgcaccgtgactttggactctttggagagtgcgctg
aaaatggacgccatttcgatgctaattagtggcgtgaaggaaaagaacttctttcttcat
tacgagtttccaccttacgcaaccaatgaaacgggaaatgtaagtcgagtaggccgccga
gaattgggacacggcgctttggcggagaaagctttgcgaccggttcttccaaaggattat
cccttcactataagactgactagcgaagtcctagaatcaaatggttcttcctcgatggct
accgtctgcggtggaagtttggcactgctcgacgcaggtataccaatatcttcggcaaca
gccggcgtggctattggtcttgtaactaaatgtaatgaaaccaatatgaatatcgaggag
tacaaaatattgaccgatatattaggaatcgaggattacctcggggacatggatttcaaa
atagcaggtaccaagcgaggattcaccgcgttgcaggctgatgtaaagataccaggtgtc
ccgttgaaaatcatgatggagtgtatacatcaggcgacgaatgctaaattggaaataatt
aagataatgaataacgtgatacgggcaccgcgacaaactaggaaggacaagatgccggtg
gtcgataacttggaggttcctattcatcaaagaggaaagttcctcggggttggtggaatg
aacctgaagaagatatttttggagaccggagtgcacatatatccgcacgatgaaaacacc
tactcaatatttgcgccaaatgaggatgccatggctgaggccaaggaaatgatagacgac
attttgcgaaaggatcgtgagccaaccttggagttcggcgctatttataccgctagaata
gtggaaattcgagaaactggggtcatggtgacgttatattccaatatggtaccggcatta
ttacctaactcacaattagaccaacgtaaaatccatcatcccagcgctttaggacttgaa
gtcggtcaagagatacaggtcaaatatttcggacgagatccagtgtccggacagataagg
atatcacggaaggtgttgcaaacaccaactttgattccgaaaactttacatcgcgatgac
gcggagaaaacgtga
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