Temnothorax americanus: 143898030
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Entry
143898030 CDS
T11456
Symbol
Rga
Name
(RefSeq) CCR4-NOT transcription complex subunit regena
KO
K12605
CCR4-NOT transcription complex subunit 2
Organism
tame Temnothorax americanus
Pathway
tame03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tame00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
143898030 (Rga)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tame03019
]
143898030 (Rga)
Messenger RNA biogenesis [BR:
tame03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
143898030 (Rga)
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
143898030 (Rga)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NOT2_3_5_C
Motif
Other DBs
NCBI-GeneID:
143898030
NCBI-ProteinID:
XP_077263177
LinkDB
All DBs
Position
Unknown
AA seq
461 aa
AA seq
DB search
MANLNFEQPPRSIANAGLASRAAGGGGGLNTVALAGHVTPTSGMFSGSSASTSSTVNSAI
VATNVYPGASSSGGGQNSHQQQRQLSPMGSRGLFGQRAFTDRRTMPALGASNPMGSMGSF
GIPPSRNYGSQGAINNFHSVFGSGGGGDTSTPPLLDLSEFPSLTNRGQGDSMPQPSPMPG
KQPYVGMVKQPTSESSEFTMSSEDFPALPGTQNREGPSPGGSMSGDKNIPVGLGPEIGQD
VLQANRAPGSEKSQSSKRGIQTSPDGKVTNIPASMVKDQFGMVGLLTFIRAAETDPNLVS
LALGQDLTALGLNLNSPENLYQNFGGPWAETPCRPQDIDFHVPPEYLINAAIRDKLAPVK
LNRYKDDLLFYMFYTNVGDVLQLAAAAELYSREWRYHMEEKVWITQAPGLGIVEKTSTYE
RGTYYYFDAQNWRKVAKEFHLDYAKLESRPHLPSNFHQTQP
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
atggccaacctgaactttgaacagccgccacgcagtatcgcgaacgcaggtctcgcttca
cgcgcagctggcggcgggggaggtttgaataccgtggccctcgcgggtcatgtcacgcct
acctcgggcatgttctcaggctcgtccgcgagcacttcgagtacggtcaactcagcgata
gtcgccactaacgtttatcccggagcgtcgagctctggcggcggacaaaatagtcatcag
caacaacggcaactctctcctatgggcagtagaggactgtttgggcagagagcttttacc
gatagacgtacgatgcctgctcttggagcttcgaatccaatgggtagtatgggcagtttc
ggaatacctccaagtcgcaattacggatctcaaggtgcgattaacaatttccactctgtt
ttcgggagtggaggcggtggagatacgagtactccacctctgttagatctctcggagttt
ccctccctaacgaatagaggtcaaggtgattctatgccgcaacctagtcccatgccgggg
aaacagccttatgttggaatggtaaaacaaccaacgtccgagtcgagcgaatttaccatg
agctcggaggattttccagcattaccgggaacgcagaatcgagaaggcccgtcacctggc
ggcagcatgtctggcgacaagaatattcctgtaggacttggtccggaaatcgggcaggac
gtgttgcaggccaacagagcacctggatctgagaaatctcaatcttctaaaagaggcatc
caaacatcgcccgatggcaaggtgacgaacatacctgcaagtatggtgaaggatcaattc
ggcatggttgggcttttgacgtttatcagagcggcggagaccgatccgaacttggtgtcg
ctggcgttaggtcaagatcttaccgcattaggactgaatttgaattcaccggaaaatctt
tatcagaatttcggtggcccctgggcggaaactccgtgtcgaccgcaggatatagatttt
cacgtaccaccggagtatcttataaatgccgcgatcagggataagctagcgccagttaaa
ctaaatcgatataaagatgatctactgttttatatgttttatacgaatgttggggatgta
ttgcaattagctgctgcggcggaactgtacagcagagagtggcgatatcatatggaggaa
aaagtttggataacgcaggcaccaggtttggggattgtagaaaagacgtcgacgtatgaa
cgtggtacttattattattttgatgcgcaaaactggagaaaggtagctaaggaattccat
ttggattatgcaaaactagaaagtagacctcatcttccttcgaactttcaccaaactcag
ccttga
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