Temnothorax americanus: 143898162
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Entry
143898162 CDS
T11456
Symbol
Fra
Name
(RefSeq) neogenin protein frazzled isoform X1
KO
K06766
neogenin
Organism
tame Temnothorax americanus
Pathway
tame04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
tame00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
143898162 (Fra)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
tame04515
]
143898162 (Fra)
Cell adhesion molecules [BR:
tame04515
]
Immunoglobulin superfamily
DCC/UNC5 family
143898162 (Fra)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
fn3
Neogenin_C
I-set
Ig_3
Ig_2
Pur_ac_phosph_N
FN3_DSCAM-DSCAML_C
ig
Fn3_VIN3
V-set
C2-set_2
C2-set_3
fn3_2
Ig_J
Fn3_Dep-1_3rd
Motif
Other DBs
NCBI-GeneID:
143898162
NCBI-ProteinID:
XP_077263575
LinkDB
All DBs
Position
Unknown
AA seq
1488 aa
AA seq
DB search
MEPRPLAVLLALLLTALARVNAGGLDFIIEPRDVVVEQGGPARLDCEAKSVFGTPNIHWR
TDDGQPITFIGDSYRSKLANGSLYINSVYAGSAELTGSYQCLASIDNVGAIVSRTATIKL
ASLPGFEREPQDTMVYAGQIAYLSCALPASSSLLKIQWLKDEHPLVLDKSRMTVLPSGAL
EIDDVQYHDVGSYRCNASGYGQYRLSNKAQLGLLSSDIDEGSSAPVFIAQPLQQIATEGS
DVTLECAANGYPKPTILWLKDGVALDLTSLDSRYRKIAASSLMIINVRESDHGSYQCRAE
NEVESLDAVAELIVQVPPRFLKKPEDKVASESQDLEFECEIYGKPEPKITWLKNGERITL
SAYWQIVNGYNLRINGLLPIDAGIFQCMGMNPAGSVQASARLTINQPKKANPHRTTTPKT
VPKKKLLLHRQLYNKTWQHPSTLLGHTFSSHMPSPPLSISPSDDPADLLPSSFKYPNSLY
DPESRFVDDTDTLEAFDGGGVPSPPRNLSLVIVTARFVTLRWQEPENANSDTLNYFIHYK
QEGAMRERVVNTQQKLEAMIRGLQPSMTYQFHVVAQNSRGTSAPSEVLQITTLIEANVPG
PPMNLEGHATSSMSITLSWEEPQVINGRISKYIITFMEGDGEEITRETTSTTYELVDLVP
YTEYSIRVQAVNENGPGAFSKDIVIRTHSAQPTQPPHNVTLEAASSTSIIVRWEPPLEGQ
NGIITGYRIRYRKYPHDPRSGDRRSPITVTTEGNQRLYVLNGLEKHVVYQVRICAFNVNG
TGPWTEWTKIETYENDLDETKVPNAPSNLRANAMADSILVSWHPPKDQSIKVRKYKLGWG
KGYPDVEIQVLDGKQRSYAIKPIEPTTEYVISLRATNNVGDGQPAYANVRTPERFVSESA
VPLIPPVGLKAIVLSASTVVLYWTDTTLSKSQYITDSRYYVVRYTFYHHSSSPRYKYYNA
TDLNCMIHDLKPNTQYEFTVKLVKGKRSSPWSMVVLNQTQEAAPSTAPRDLIIQTVEDRP
TSVLLRWQPPKQPNGQITGYLIIYSTDNTRWDRDWLVEGVIGDKVDAIVKGLHPNTMYYF
KIQARNSKGYGPFSTTVSFKTPQSNGMDDELHGDGRSFSNLLIYIIVGLSIVFITAISVV
VVVCCKRNPSSPDRKKGYMKDSNQKTNIKPPDLWIHHDQMELKALEKSSLNGEASTSGVT
SNTLPRSSNPEYNQDIHGNSSSLDKRTYVPSYMGNTDEKCSTLSRQHSRGSHKPKLITLP
VDSAPLHQPIATATPIVNTSMSQPTIHTSCSDTSSVRQNYPRTVAQYSLNRAHVTLEPTP
ESSPDSCNMPSSYEPLQSQLSYGTSGQSYSGNTQYTPGHYGNSTQPMSSAVGVESNGSKR
LQGHPLKSFSVPAPPPQSAPSTPAQQKHGVSQVTVRPTMSGSPYKKPQGSSSQLTKNRLA
SVSNPAHTSEEVERLKPSYSTEELNQEMANLEGLMKDLNAITASEFEC
NT seq
4467 nt
NT seq
+upstream
nt +downstream
nt
atggagccgcgtcccctcgccgtcctgctggctttgttgttgacagcgctcgcacgagtc
aacgcgggaggcttggacttcatcatcgagccgcgggatgtggtggtggaacaaggaggt
cccgcgaggctggactgcgaggcgaagagcgtctttgggacgccgaatatacactggcgt
acggacgacggtcagccgatcacgtttatcggggacagttaccgatcaaagctagcgaac
gggtccttgtacataaatagcgtgtacgctggtagtgcagaattaaccgggagttatcag
tgcttagcctccatagacaatgtcggagcgattgtctctcggacagccacaatcaaacta
gcaagccttcccggcttcgaaagagaacctcaggacaccatggtttacgcgggacagatt
gcatatttgagttgtgcgctacccgcttcctcgagtttgttaaagatacaatggttaaag
gacgaacatcctttagtgctcgataaaagtcgaatgacagtcctgccgtcaggcgcgttg
gaaatcgacgatgttcagtatcacgatgtaggatcgtacagatgtaacgctagcggctac
ggccaatatagactgagcaacaaagcacaattaggattattatctagtgacatcgatgag
ggatctagcgctccagtattcattgcacaacccttgcaacaaatagccaccgaagggtct
gacgtgaccctggaatgcgccgccaacggctatccgaaaccgacgattctttggcttaaa
gacggcgtcgctctcgatttgacgtcactcgactctagatatcgaaagatcgcagcatct
agtcttatgatcataaatgtccgagaatcggatcacggttcgtatcaatgccgcgcggaa
aacgaggtcgaatctctggatgcagttgctgaattaatcgtacaagttccgccgaggttt
ctaaagaagccggaggataaagtggcgagcgagagtcaagatctagaattcgaatgcgag
atttatggaaaaccggaaccgaaaattacctggctgaaaaatggcgagcgtatcacgttg
agcgcgtactggcaaattgtcaatggatacaatctgagaatcaatggactgttacccata
gatgcaggaattttccagtgcatgggaatgaatcctgccggtagtgttcaagcctcagca
cgtctcacaattaaccagcccaagaaagcaaatccccatagaacaacaactcccaagaca
gttcctaagaaaaaattattgctacaccggcagttgtataataagacatggcaacacccg
agcactctcttaggacacacgttctcgtcgcacatgccgagtcctccactttcaatcagt
ccctctgacgatcccgcggatctcctcccgagctcgtttaagtatcccaactccctttac
gacccggaatcccgttttgtagatgacacagatactctggaagcgttcgacgggggtggc
gtaccctctccaccgaggaatttgagcctcgtcatcgttaccgcgagattcgtcacgcta
cgctggcaagagccggaaaacgcgaacagcgatactctcaattattttatacattataaa
caagaaggggccatgagggagagagttgtcaacacgcagcagaaactggaggccatgata
cgcggtttacagcccagtatgacgtatcaattccatgtggtcgcgcaaaattctcgaggc
accagtgctcctagtgaagtattacaaattacaacgctaatagaggccaatgttcctggg
cctccgatgaatctggagggtcatgcgacaagcagcatgagtattactttgtcgtgggag
gagccacaagttattaatggacgaatatctaaatatattattacatttatggagggcgac
ggtgaagagataacgcgtgaaactactagtacaacgtatgaattggtagatctcgtgcct
tatacggaatacagtattagagttcaagcggtcaacgaaaatggcccgggcgcgtttagt
aaggatatcgtaattcggactcacagtgcacaaccgacgcaaccaccgcataacgttacc
ttagaagcagctagttcaacgagtattatcgtaagatgggaacctccactcgagggacag
aatgggataatcacgggttatagaatacggtatcgcaaatacccgcacgatcctcgatcc
ggggatcggcgatccccgattacggtgacaactgaaggaaatcaacgtttgtacgtgcta
aatgggctcgagaagcacgttgtgtaccaagtccgcatatgtgccttcaacgtcaatgga
actgggccttggacggaatggacaaagatagagacatacgagaacgatttggacgagacg
aaagtacctaatgcgcccagtaatctgagagcgaatgccatggcggattctatactagta
tcgtggcatcccccgaaagatcaaagcattaaagtgagaaaatataagttaggctggggc
aaaggctaccccgatgttgagatacaggttcttgatggaaagcaacgatcttacgctatt
aagcctatagaaccaacaacggagtacgtgatatctttaagagcaacgaataatgttggc
gatggtcagccagcatacgcgaatgtaagaactcccgaacgttttgtatctgaatccgca
gtgcctttaataccacccgttggccttaaagctatcgtgctctcggcttctaccgttgta
ctgtattggacagacacgaccttatcgaaaagtcaatatatcaccgatagtcgatactat
gtggtgcgttatacattctaccatcacagcagtagcccaagatacaaatattacaatgct
accgatctcaactgtatgattcacgacttgaaacccaatacgcagtatgagtttacagtt
aaactggtcaagggtaaacgaagctcgccgtggagtatggtcgttctaaatcaaacgcaa
gaggctgcacctagcacggcacctcgggatctgatcattcaaaccgtcgaggatcgtccg
acctccgttctgctgcgatggcaacctcctaagcaacccaatggacagatcacaggatat
ctgataatttattccactgacaatacgagatgggatcgcgattggttggtcgaaggtgtc
attggcgacaaggtggatgccatcgtaaagggtctacatcctaacacgatgtattacttc
aaaatccaagctcgtaactccaagggatacggaccattctctacgacagtctcatttaaa
acaccacaaagcaatggcatggatgatgaattgcatggagatggacgaagcttttcgaat
ctattgatttacatcatagtaggtctctcgatcgtctttatcactgccatatcggtagtg
gtcgtagtgtgttgtaaacgtaatccaagctcgccagatcgaaagaagggatatatgaaa
gattcgaatcagaagacgaatatcaagccgccggatttgtggatccatcatgatcaaatg
gagctgaaagcgcttgagaaatcgtcgctaaatggtgaagcctccaccagcggcgtcacc
agtaatacattacctaggtcgagcaatccagaatataatcaagatatacatgggaattcc
agttcgctggataagcgtacttatgtgccaagttatatgggtaacactgacgagaagtgc
tcaaccctgagcaggcagcacagtcgtggaagccacaaacctaaattaattacactcccc
gttgacagtgcacctttgcatcagcctatagctacggctacgccgattgtgaataccagc
atgtcgcagccgaccatccacacctcgtgcagcgatacgtcgtcggtgagacaaaactat
ccgcgaacggtcgcgcagtatagcttaaatcgcgcgcacgtcacgttggaaccaaccccg
gagtccagcccggattcttgtaacatgcctagctcgtacgagccgttacagagtcagtta
tcgtatggtacgagcgggcaatcgtacagcggtaacactcaatacacccccggtcattat
ggcaatagcactcaaccgatgagcagtgccgttggggtggagagcaatggtagcaagcgg
ctgcaagggcatcctcttaagagcttcagcgtgccggctccgccgccgcagagtgcccct
tcgacaccggcgcaacaaaagcacggtgtgtcacaagtgacagtgaggccaacgatgtcc
gggagtccgtacaaaaaacctcaaggttcgtcgtcgcaattaacgaagaatcgcttagcc
tctgtgtcaaatccggcacatacttcggaggaagttgaacggctaaagccttcgtacagc
accgaagaattaaatcaggaaatggccaacttagagggtcttatgaaagatctgaatgcc
ataacagcatcggaatttgaatgctaa
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integrated database retrieval system
