Temnothorax americanus: 143898690
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Entry
143898690 CDS
T11456
Symbol
Pms2
Name
(RefSeq) mismatch repair endonuclease PMS2
KO
K10858
DNA mismatch repair protein PMS2
Organism
tame Temnothorax americanus
Pathway
tame03430
Mismatch repair
tame03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
tame00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
143898690 (Pms2)
03460 Fanconi anemia pathway
143898690 (Pms2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tame03400
]
143898690 (Pms2)
DNA repair and recombination proteins [BR:
tame03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
143898690 (Pms2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutL_C
DNA_mis_repair
HATPase_c_3
HATPase_c
Motif
Other DBs
NCBI-GeneID:
143898690
NCBI-ProteinID:
XP_077264458
LinkDB
All DBs
Position
Unknown
AA seq
672 aa
AA seq
DB search
MDEPVATTEKSKKIEAINKETVHHICSGQVVLDLAIAVKELVENSLDSGATVIDVKLTDY
GKTCISVSDDGSGVLERDFEGLGLKHHTSKLREFTDLTEVNTFGFRGEALSSLCALSELS
IVTRHASNEHGFKLEFDRNGVLAKREPCARERGTTVHARNVFKNLPVRAKEFQKNLKKEY
ARVIQVLYSYCLVSTNIKITCSNLIAGKSPNLIVATRNTDDVLDNVNSVFGKKSLDGIVK
LELQPPDETVLQEYNLPNDITVDFDWECYVSTCDHTVGRSSPDRQFFYVNGRPCDLTKIS
KLINSVYHKYNNKQYPFVFFNIKLDRQCADVNVTPDKRTIFVTQERLVLATLKYSLTTKW
DKLQGNFTVKTLTELNFGLKRTISPNHTQPPAKRLQVSPSVSHTVKESNIQTNIRSMKKP
VDVEMMISTVTIKEKLNEKKSIAGAVVSTAKRIKYRVQMEANQREAEQELQRELTKDSFG
KMEIIGQFNLGFIIARLENDLFIIDQHATDEKFRFEKLSNETKLKTQKLIVPKSLNFSAL
NETILIEHQQTFEDNGFTFNINEQAEPGKKIELTGMPVSGHWQFGQEDIEELVFLIREAG
NEHKDKHIYRPSRVRQMLASRACRSAVMIGTALNTSEMQKLVTQMAQMQNPWNCPHGRPT
IRHLLSLLLMNK
NT seq
2019 nt
NT seq
+upstream
nt +downstream
nt
atggatgagcctgttgcaacgactgagaaatcgaaaaaaatagaagctataaacaaagaa
acggtccatcacatctgctccggccaggtggtgctcgatcttgcgatcgcagtcaaagaa
ttagtggagaacagtttggacagcggtgctacggtgatcgacgtcaagcttaccgattac
ggtaaaacgtgcattagcgtcagtgacgatggtagcggcgttttggaacgggacttcgaa
ggcttaggcttgaaacaccacacctcgaagcttcgggaattcacagacttaactgaagta
aatacattcggcttccgtggcgaagcgttgagttcgttgtgcgctctgtccgagctgagt
atcgtcacgaggcacgcatccaacgagcatggctttaaattggaattcgaccgcaacggc
gtgctcgcgaagagagaaccgtgcgccagagaacggggtaccacggtacacgcgaggaac
gtatttaaaaatctgccggtgagagcgaaggagtttcagaagaatctgaagaaggagtac
gctcgcgttatccaggtcctgtacagttactgcttggtctccaccaacatcaagattacg
tgttccaatttgatagcgggtaaatcgcccaatctaatcgtggccacgagaaacaccgac
gacgtgctggacaatgtaaattccgtgttcggcaagaagtctctggacgggatcgttaaa
ctcgaattacaaccaccggacgaaacagtattgcaagaatacaatttgcccaatgacatt
actgtagatttcgattgggagtgttacgtgagcacttgcgatcacacagtcggacgttcc
tcgcccgatcgacaatttttttacgtaaacggtcggccgtgtgatttaacgaagatcagt
aaactgatcaacagcgtgtatcacaagtacaacaataagcagtatccgtttgtcttcttt
aatatcaaattagatcgacagtgcgccgatgttaatgtcactcctgacaaaaggacgata
ttcgttacgcaagaacgactcgtattagcgacactgaaatacagtttgacaacaaaatgg
gacaaactgcaagggaattttacagttaaaactttaacggaattaaattttggcttgaaa
agaacaatctcgcctaatcacacgcagccgccggctaaaagattacaagtatcaccttcg
gtatcgcatactgtgaaagagagtaatattcagactaatatcagatcaatgaaaaagcct
gtagatgtagaaatgatgataagtacagtaacgataaaagaaaaattaaatgaaaaaaag
agtattgctggagcagttgtcagtacagctaaaagaataaaatatagagtacaaatggaa
gctaatcaacgtgaggctgaacaagaactgcagagagaattgacaaaagattcattcggc
aagatggagataataggtcagtttaatcttggtttcataatagcccgcttggagaatgat
ctatttatcatcgaccaacatgccaccgacgaaaaatttcgcttcgagaagctcagtaac
gaaacgaagctgaaaactcaaaagcttattgtaccgaagtcgctaaatttctctgcgctg
aacgaaacaatactcatagaacatcagcaaacatttgaagataatgggtttacctttaat
atcaatgaacaagccgagcctggcaagaaaatagaattgacaggaatgcctgtcagtggt
cattggcagtttggtcaagaggatattgaggaattggtatttcttatcagagaagcaggc
aatgaacacaaagataagcacatatatcgtccgagccgtgttaggcaaatgttggcgtcc
agagcatgtcgcagcgcggtcatgatcggcacagcgttaaacacaagtgagatgcagaag
ctggtaacacaaatggcacaaatgcagaatccatggaactgtccacatgggaggcccacc
ataaggcacctattatccttattgctaatgaacaaatga
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