Temnothorax americanus: 143899445
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Entry
143899445 CDS
T11456
Name
(RefSeq) polyadenylate-binding protein 4-like
KO
K13126
polyadenylate-binding protein
Organism
tame Temnothorax americanus
Pathway
tame03015
mRNA surveillance pathway
tame03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tame00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
143899445
09123 Folding, sorting and degradation
03018 RNA degradation
143899445
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tame03019
]
143899445
03041 Spliceosome [BR:
tame03041
]
143899445
Messenger RNA biogenesis [BR:
tame03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
143899445
mRNA cycle factors
Stress granule specific factors
143899445
Spliceosome [BR:
tame03041
]
Complex C
Other components
Complex C specific factors
143899445
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
MLLE
RBD_DEAH11
RRM_7
RRM_10
RRM_occluded
Nup35_RRM_2
POP1_C
Motif
Other DBs
NCBI-GeneID:
143899445
NCBI-ProteinID:
XP_077265868
LinkDB
All DBs
Position
Unknown
AA seq
634 aa
AA seq
DB search
MNPGAPNYPMASLYVGDLHTDITEAMLFEKFSSAGPVLSIRVCRDMITRRSLGYAYVNFQ
QPADAERALDTMNFDMIKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKNIDNKAMYDTFS
AFGNILSCKVAQDESGASKGYGFVHFETEEAANKSIDKVNGMLLNGKKVYVGKFIPRKER
EKELGEKAKLFTNVYVKNFGEDMNDEKLKEMFEQYGTITSHKVMSKDDGKSRGFGFVAFE
DPDAAEQAVMELNGKEIAEGKFMYVGRAQKKAERQQELKRKFEQLKIERLNRYQGVNLYV
KNLDDTIDDERLRKEFTPFGTITSAKVMMEEGRSKGFGFVCFSQPEEATKAVTEMNGRIV
GSKPLYVALAQRKEDRKAHLASQYVQRMANVRMQQMGQIFQPSNAGSYFVPTLPQPQRFY
GPAQMAQIRATPRWPAQPNQVRPNAQTGTSGFASMQAAPFRAAPRAPAAQATLRNSMSAR
PITGQQAIGGANMQNRSMTGPGVGVSPGQSRPSNYKYTANMRNPPQATMNLPAPSGPSVQ
QAVHIQGQEPLTASMLAAAPPQEQKQMLGERLFPLIQCMYPQLTGKITGMLLEIDNSELL
HMLEHSESLKAKVEEAVAVLQAHQAKQAVAPKKE
NT seq
1905 nt
NT seq
+upstream
nt +downstream
nt
atgaatcctggtgcgcccaactaccccatggcctcgctctacgtgggcgacctgcacacc
gacatcaccgaggcgatgctgttcgagaagttctcgtcggccgggcccgtgctgtcgata
cgcgtgtgccgcgacatgattacccgccgctcgctcggctatgcatatgtcaacttccag
caaccggctgatgccgaacgcgcccttgataccatgaatttcgacatgataaaagggcgg
cctattcggatcatgtggtcgcagcgcgatccctctttacgcaagtcgggcgtcggaaat
gtatttattaaaaacctagacaaaaacatagacaataaagcgatgtacgacacattttcc
gcgttcgggaatatattgagctgcaaggttgcgcaagatgaatcgggcgcgtcgaagggt
tatggctttgtacattttgaaacggaggaagcggctaataaatctatcgacaaagttaac
ggaatgttgctaaatggcaagaaggtgtacgttggcaaattcatcccgcgtaaggaacgg
gagaaagagttgggcgagaaggccaaactgttcacgaacgtctacgtgaagaacttcggc
gaggatatgaacgatgaaaagctgaaggagatgttcgagcagtacgggaccatcacaagc
cacaaggtgatgagtaaggacgacggcaaatcacgtgggttcggatttgtcgcgttcgag
gacccggacgctgccgagcaggcggtgatggaactgaacggcaaggagattgccgaaggc
aagtttatgtacgtcgggcgggctcagaagaaagccgagcgccagcaggagcttaaacgg
aaattcgagcagctgaagatcgagcgtctgaatcgttatcaaggcgtgaatttatacgtg
aagaatctggacgacacgatcgacgatgagcgtctgcggaaagaatttacgccgtttggc
acgatcacgtctgcgaaagtgatgatggaggaaggacgtagcaagggtttcggcttcgtg
tgcttctcacagccggaggaagctactaaggcagttaccgagatgaacggacgcatcgta
ggttccaagcctctctatgtcgctttggcgcagcgtaaggaggatcgtaaagcacatctc
gcctctcagtacgtgcagcgcatggcgaacgtgcgcatgcagcagatgggtcagatattc
caacccagtaatgccggcagttacttcgtgcctacgctgccacagccgcagcgattctat
ggacctgctcaaatggcgcagatccgcgctacaccgcgctggccggcccaaccaaatcaa
gtacgaccgaatgctcagactggcacctccgggttcgcgtcgatgcaagctgcaccgttc
cgtgcggcgccgcgcgctcctgccgcacaggctaccctgcgtaacagcatgtccgccaga
cctatcacaggtcaacaagcgattggtggcgccaacatgcaaaatcgttccatgactgga
ccaggcgttggcgtctcgcccggtcagagccgtccgtcgaactacaagtacaccgcaaat
atgcgcaatccgccgcaggcgaccatgaatctacctgcaccgagtggtccttctgtgcag
caggcggttcacattcagggtcaggagccgctcaccgcgtcgatgctagccgcggcgccg
ccacaggagcaaaagcaaatgctaggggaacggttattccctctgatccaatgtatgtat
ccacaactgaccggcaagatcaccggtatgttgctggagatcgacaacagcgagctgctt
cacatgctggagcacagcgagtccctgaaggccaaggtcgaggaagccgtggccgtatta
caggctcatcaggccaagcaagcggtcgcgccgaaaaaggaataa
DBGET
integrated database retrieval system
