Temnothorax americanus: 143899841
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Entry
143899841 CDS
T11456
Symbol
Taf1b
Name
(RefSeq) TATA box-binding protein-associated factor RNA polymerase I subunit B isoform X1
KO
K15213
TATA box-binding protein-associated factor RNA polymerase I subunit B
Organism
tame Temnothorax americanus
Brite
KEGG Orthology (KO) [BR:
tame00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tame03021
]
143899841 (Taf1b)
Transcription machinery [BR:
tame03021
]
Eukaryotic type
RNA polymerase I system
Basal transcription factors
SL1/TIF-1B
143899841 (Taf1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rrn7_cyclin_C
Rrn7_cyclin_N
Zn_ribbon_RRN7
Motif
Other DBs
NCBI-GeneID:
143899841
NCBI-ProteinID:
XP_077266648
LinkDB
All DBs
Position
Unknown
AA seq
1035 aa
AA seq
DB search
MRNNHVVTEHNLSVARNITGLTEARSPRFTPSRVHLAFRTIAFEQLLKKMLECGVCGCSD
FYKASGYFFCTTCQTQSQDVGQEVELELPIENTTRLRKTKIHRAKSDKTDEALGWTSWEL
YNFVLIGLTNELIELGISADIKITVLQLWARYLGKLEIAFVSTKKKPIPKLARRFRKRDA
EIIYGKVLSQKRARKRRKTGSSLADSTASTYPTEETSLRELNRNKKLMITADYDRFMRSQ
TGSEGDVLGTFSQSACSAHSSAGQSCESTSTRIQFNSSAKEETSRIKNMAKRVPRHKRNK
YKQSHVTTRYKTGPGLITPTKLWAILYLALRIHNQDIHLGDMIRYGREGHLSYYRLDRLV
PPEVSLTRSDMNFLSRAMDVTHKGMRRIIGRMAKFLGVTKIICPDLLSLVNRYCTELALP
KSISSYAERLISLSAPKMTFDKKSCIPNYEGRAMAFIIVVLKTLLSLDGITENEISNVAD
KINSAINDEGICDTKLFSFREWQKYIECRRAVLINAHCPTKLKYNPNIPDVNSSYIKFLD
STGSKTDREEAEIITHKHLMPRDLVCAMKQCITNVSYTDLPLNEVNEFSPTLTPSHSYLE
QLLEHPLYDLPSMLRNDFSSAKSGHLTKSESIFKLTSRYGIRLDSVDSNLHFVEKTVSLF
EQTKIATVKDLMGTNAIEDFLEEDVKCVERKEDFIDYLHKKIPCRIKIDIKKKQHYDDIR
STITDTYACEKNTCASATASADEYIFNEILPDGKLSIPSRRRADDDDKDDDDDARLKDIV
PGQTLSELSLFEFCKAYNTDLSSTEKRAIFKDLRLTKKRKRKLVRDARGKFVKQNDIDRL
GMESPSKGDRCYAEETEETESISADTSEIENILPEMSDILNSSTNASVLDTLINVESGRG
VDANQSIDEKSRKESLFISDKTPTSHADNILRLFRPFKDYWTYHCNFSRVKPKNFELFEK
MLPRSFRWLLNEGANLVETSTEDLYEEACLVEAYCAYVLEQSKIYSSSRSSATRPTSKRE
NCNNRAYVNVILKKW
NT seq
3108 nt
NT seq
+upstream
nt +downstream
nt
atgcgcaacaaccacgtggtgactgaacataacctatcggtcgctaggaatataactgga
ctaactgaagcccgaagtcctcgtttcaccccttcgcgcgtacatctggcgtttcgtaca
atcgctttcgaacagttactaaagaaaatgctcgagtgtggagtctgtggctgtagcgat
ttttataaagcgtccggttatttcttttgtacgacgtgtcaaacgcaaagccaggatgtc
gggcaagaggtagagctggaactgcctatagaaaatactacgagattgcggaaaacgaaa
atccatcgtgcgaaaagtgacaaaacagacgaggcgctcggatggacgtcttgggaatta
tataattttgttttaattggtttgacaaacgagcttatcgaacttggtatatcggccgat
ataaaaataacggtgttgcaattgtgggcacgatatctgggaaaactagaaatagccttt
gtctccacgaaaaagaagccgataccaaaactggccagaagattcagaaagagggatgct
gaaattatatatggcaaagttttgtcgcaaaagagagctaggaaacggagaaaaactgga
agcagcttagcggattctacagcttctacctatccaaccgaagaaacttccttaagagaa
ttaaataggaataaaaaacttatgattaccgcggactacgacaggtttatgcggtcacaa
acgggctcggaaggagatgtactcggtacgtttagtcaaagtgcgtgtagcgcgcactcc
agtgcgggacaatcttgcgaaagtacgagtacgaggatacaatttaattcctctgccaaa
gaggaaacaagtagaatcaaaaatatggcaaaaagagtaccgagacacaagcgcaacaaa
tacaaacaaagtcatgtaacgactcggtataaaacaggaccgggattgattacgcctaca
aaattatgggcaatcttgtatctggctttaaggattcacaatcaggatatacatttaggt
gatatgataagatatgggagagaaggacatttatcttattacagactagatcgcttagta
cctcccgaagtatctttgacaagaagcgatatgaatttcctgtcacgagctatggacgta
acgcacaagggtatgagaagaattattggacggatggcaaaatttcttggggtcacgaaa
ataatttgtccagatcttttatcccttgttaatcgatattgcaccgaattagctctgcca
aaaagtatatcatcatatgcggaaagattgataagtttatccgctccgaaaatgacgttt
gataaaaaatcttgtattcctaattacgaaggccgtgccatggcattcattattgtagta
ctgaaaacattgctgagtttggatggtattacggaaaatgaaattagtaatgttgccgac
aagattaacagtgcaattaacgacgaaggtatctgcgacacaaagctattcagttttcgg
gagtggcagaaatatatcgagtgtagaagagccgttttaattaacgcgcactgtcctacc
aagttaaaatataatccaaacataccggatgttaatagctcgtatattaaatttttggac
tctaccggttctaaaacggacagagaagaagccgagataattacgcacaagcatttgatg
ccacgtgatctcgtttgtgcaatgaaacagtgcattaccaacgtaagttacaccgattta
ccattgaacgaggtaaatgaattttctccgacgttaacgccaagtcactcgtatctcgaa
caattgttggaacatccactatacgatcttccgagtatgcttcgaaatgacttttcgtct
gcaaaaagtggacatttgacaaaatcagaatctatcttcaaattgacttcgcgatacggc
attcgattagattccgttgattcaaatttgcactttgttgaaaaaactgtatcacttttc
gagcaaacaaaaatcgccacggtgaaagatttgatgggcacgaatgcaatagaagatttt
ttggaagaggatgtgaaatgcgttgagagaaaggaagattttatcgattatctacataag
aagataccgtgtcgaattaaaattgatataaagaaaaagcaacactacgacgatattcgg
agtacaatcacagatacgtatgcgtgtgaaaaaaacacttgtgcgtcagcaaccgcatcg
gctgacgaatatatatttaacgagattctcccagacggtaaattatcaatcccaagtaga
cgtcgagcggatgacgacgataaagatgacgacgacgacgcacgtttaaaagatatcgtt
cctggacaaactttatcggaattatcattgttcgagttttgcaaagcgtacaatacagat
ctgtcgagtacagaaaagagagctatatttaaagatttaaggctaacgaagaaacggaag
cgcaaactcgttcgagacgcgcgtggtaaatttgtcaagcaaaatgatatcgatcgtctc
ggtatggaaagtccaagtaaaggtgatcgttgttacgcggaagaaaccgaagaaaccgaa
agtatttcagcagatacttccgaaattgagaatatactaccagagatgtccgatatttta
aactcgagcaccaacgcatctgttctcgacacgttgatcaacgtggaaagcggacgtggc
gtggacgcgaatcaatccatcgatgagaaatctcgtaaagaatctctctttatttcggat
aaaactccgacgtcacacgcggacaatattctcagattgttcagaccttttaaagattat
tggacgtatcattgcaattttagccgcgtgaagccaaagaatttcgagttattcgagaaa
atgctgccgaggagttttcgatggttgttaaacgaaggcgcgaacctcgtcgaaacgtca
acggaagacctgtacgaagaagcgtgtctggtcgaagcttattgcgcgtacgtcttggag
caatccaagatttattcgtcgagccggtcgagcgcgacgaggccgacaagcaaacgtgaa
aattgcaacaaccgagcgtacgtcaatgtgattttgaagaaatggtaa
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