Temnothorax americanus: 143900192
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Entry
143900192 CDS
T11456
Symbol
Lds
Name
(RefSeq) transcription termination factor lodestar isoform X1
KO
K15173
transcription termination factor 2 [EC:5.6.2.-]
Organism
tame Temnothorax americanus
Brite
KEGG Orthology (KO) [BR:
tame00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tame03021
]
143900192 (Lds)
Transcription machinery [BR:
tame03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
143900192 (Lds)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
DEAD
SWI2_SNF2
DUF4942
Herpes_ORF11
Motif
Other DBs
NCBI-GeneID:
143900192
NCBI-ProteinID:
XP_077267373
LinkDB
All DBs
Position
Unknown
AA seq
1016 aa
AA seq
DB search
MEPKRLFAQWRDSCFEDNSIIISDSDEADRSVLERSRDIVRRIIDESYEVDDANVSKNAE
NIENSTPRRDKFSDAADDDDTTPVIHPRNLNIRKKKNIVESDDDSDDYEPTNDYEDEEYH
TFSDINNTNSGSSPSYSPIKTKGKKRKDVTHDNTKEDIKELKPNSSSDSLINMNDINPDN
LHEQSDFDYKTADGEDKALQDVAVTIALDSDSASGQSGQNSDSEIAKSFARHEITNGRNV
DPLVAQKRAITVCKLEQLKNESAQMKRVLEGNMEAFPDKGQKIQECIRQKEEEIGILTRE
LENTPLVPLPSGQETEVAENSRFMKESSRMFQDESYSDSTDPDDDDDDESYDSYGGTDNI
PMNPRSSPELRELGKKAQATRDKELALTVERLQDLHGSLVARPSENEKAEDPRGLKVELM
PHQKHALAWLLWREQQKPSGGVLADDMGLGKTLTMIALTISTLAMKDPDDDDDESDDDDG
DWTNKSKPLRHKGGTLVVCPASLLSQWENEVRNKCKRGLLSIEVHHGTNRQSLPKRLARN
DMVITTYNILSREYKSNSTLFKINWKRVILDEAHVVRNHKSQASEAVCGLMANKRWALTG
TPIQNKELDLYSILKFLRCSPFDDLRVWKRWVDNKNAAGHQRLATVMKTLMLRRTKQELM
AKGDLENLPDKSIEEVTVELDHQEQLVYEKILVYSRTLFAQFLAQRAEKEHMFDLYGGRY
NKPAYLANPNKETQFTKAQNKLLSMHASVSVKTHEILVLLLRLRQICCHPALIHAMLDQE
DVKQSGIMDTENVDADFLSRVNNMSLNGINNANEEDEIGVDERVAGNLLTAENPVFDDDR
ISSKMTILLDKVKEILQKDNDKLIIVSQWAKLLDIIASHLVVIKGATFSKFTGSVAIKDR
QGILESFNKRNSGPRILLLSLTAGGVGLNLVGANHLLLFDIHWNPQLETQAQDRIYRFGQ
TKNVYIYKFVCVNTIEERIKALQERKLEIARNVLSGDGSNAATKLTLHDLKSLFGF
NT seq
3051 nt
NT seq
+upstream
nt +downstream
nt
atggagccaaaaaggttgttcgcgcaatggcgcgactcatgcttcgaggacaattccatc
atcatctccgacagcgacgaggccgatagaagcgttctcgaacgctcgagggatatcgtc
aggcgaatcatcgacgagagctacgaggtcgatgacgccaacgtttcgaaaaacgccgag
aacatcgagaactcgacgccgagaagggataaattcagtgatgctgctgatgatgatgat
acaacaccagtcattcacccaagaaacttaaatattagaaaaaaaaaaaacatagtagaa
tctgatgatgacagcgatgattatgaacccaccaatgattatgaggatgaagagtatcat
acatttagtgacatcaataatacgaattcaggttcttctccttcgtattcaccgattaaa
accaagggtaaaaaaaggaaagacgttactcatgataatactaaggaagatataaaagaa
ttaaaacccaattcttctagtgactctcttattaatatgaatgatattaaccctgataat
ttacatgaacaaagtgattttgattacaaaacagcagatggagaagataaagctcttcag
gatgtagctgtgactatcgcgcttgattcagattctgcttctggacaatccgggcaaaac
agcgattccgaaatcgcaaagtcttttgcaagacatgaaattacaaatggtagaaatgtg
gatccgttagtagcacagaaaagagcaataacggtttgcaaattagagcagcttaaaaat
gagtcagcccaaatgaaacgagttcttgaaggaaatatggaagcatttcctgataaaggg
cagaaaatacaagaatgtatacgccagaaagaagaagaaatcgggatattgacacgggaa
ttggaaaatacccctttggtgccacttcctagcggtcaagaaaccgaagtagcagaaaat
tctcgtttcatgaaggaatcgtcacggatgttccaagatgagtcatattcagattccaca
gaccctgatgatgatgatgatgatgaaagttatgattcatatgggggtacagacaatata
ccaatgaatcctaggtcatctcccgagttaagggaactgggcaaaaaggcacaagccacc
agagataaggagcttgctttaacggttgaacgattacaagatttgcacggatcactcgta
gctcgtccgtcagaaaatgagaaagcagaagatccaaggggattgaaggtagaattaatg
ccacatcaaaagcatgctctcgcatggcttttgtggagggaacagcaaaaaccatccggt
ggcgttttagcggatgatatgggcttgggcaaaacactgactatgatagctttgactata
agcactcttgctatgaaagatcctgatgacgatgatgatgaaagtgatgatgatgatggc
gattggactaacaagagcaaacctttacgtcataagggtggtactctggtagtatgtccc
gcgtccttattgtcgcaatgggaaaacgaagtacggaacaaatgcaaacgcggtttactg
tctattgaagtgcatcatggcactaatcgtcagagccttcctaaaagattggcgagaaac
gatatggtcatcacaacgtataatatattgtctcgtgaatataaaagcaattctacgtta
tttaagatcaactggaagagagttatacttgatgaagctcatgtagtgagaaatcacaag
agtcaggcatccgaagcggtttgtggactgatggcgaacaaacgatgggctctcaccggc
acacctatacaaaataaagagttagatttatactctattctgaagtttctcagatgctca
ccgttcgatgatctacgcgtttggaaacgatgggtagacaataagaatgccgcaggtcat
caaagattggcgacggtcatgaagacgttgatgttgcggagaactaaacaagaactgatg
gccaaaggcgatttagaaaatttacccgacaagtctatcgaggaggtgacggtggaactc
gaccatcaggaacaattggtgtacgagaaaattttagtttactcccgtactttgtttgca
caatttttagctcaacgtgcggaaaaagagcacatgttcgatttgtatggtgggaggtat
aataagcccgcctatcttgcaaacccaaacaaggaaactcagttcacgaaagcacagaac
aaattgctgtcgatgcacgcctcagtatcagtaaagacacatgagattttggtactcctt
ctacgattacgtcagatatgttgccatccggcattaatccatgcaatgttggatcaggaa
gacgtgaagcaaagcggtataatggatacagaaaacgtggatgccgatttcttatccaga
gtaaataacatgtcactcaatggaatcaataatgcgaatgaggaagatgaaatcggtgtt
gatgaaagagtagccggaaatctacttactgctgagaacccagtgttcgacgatgatcgc
attagttccaagatgacgatactgcttgacaaggttaaagaaattttacaaaaggataac
gataaactcatcattgtttcacaatgggcaaagctactggatatcatagcatcacacttg
gttgtgataaaaggtgctacgttcagcaagttcacaggaagtgtcgccatcaaagatcga
caaggtatattggaatcttttaacaaacgaaattccggtccaagaatcctgttgctctca
cttacggctggcggagtgggattaaacctggtaggcgcaaatcacttgttattatttgac
attcattggaatccgcagttagagacgcaggcgcaagataggatttatcgttttggtcaa
acaaagaatgtctacatctacaaatttgtttgtgttaatacaatagaagagcgtattaaa
gcgttgcaagaacgaaaacttgaaatagcgcgaaatgtactgagcggcgatggaagcaac
gcagctacaaagcttacgttgcacgatctcaaatcgttattcggcttctga
DBGET
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