Temnothorax americanus: 143900218
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Entry
143900218 CDS
T11456
Name
(RefSeq) cholesterol transporter ABCA5
KO
K05648
ATP-binding cassette, subfamily A (ABC1), member 5
Organism
tame Temnothorax americanus
Pathway
tame02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
tame00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
143900218
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
tame02000
]
143900218
Transporters [BR:
tame02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA5, 6, 8, 9, 10 subgroups
143900218
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
AAA_21
R1_ABCA1
AAA_23
RsgA_GTPase
AAA_29
TsaE
MukB
MMR_HSR1
DLIC
Motif
Other DBs
NCBI-GeneID:
143900218
NCBI-ProteinID:
XP_077267428
LinkDB
All DBs
Position
Unknown
AA seq
1700 aa
AA seq
DB search
MNSCALYFAQLRAMLVRNLLLKKRDTRKTFMEVVLPLYILGALIVVKAMIPNPNFPAMTT
QRHEGDIFKLFKGYKNNTIAVVPNSTETLSFLNYMNSLWRSMLDYPDKLPLNFMVFDTKD
DLQAAYWRDPYSVPLAVIFEDPLPISQRLIYEIRTNPSYTLPVSPTELYSAPISCRKNKT
GHWMGDILSIKTGESCPVNNYLHSGFLALQMIMDITKIRLDMGNSDVPIPDIKLIMFPKE
AYTADWMLAFRVVIPLYMVLALSQFVTYLLILIVGEKENKIKEGMKMMGLNDSVFWLSWF
IIYSIFVFLLSAVGVVLLFTLQMFQHTHFLPIFLLVVLYSFSVIMFAFMITPFFDKSRTA
GVLGNFAVTILSLMYFIQVFVRDSSSVTYWFVSLISPAAVALAMDKALVLDLQGEGVNFD
NLWSGPGIPFGGSLIMMTLDIFLYGYLAYYLDSVIPSEHGTKRPPWFCFLRGYWCSKKVQ
RVPSSNGESNSFIPGEEANRDVEPVVREMKGREAIRIADLYKSFHKCRRPEIKAVNGINL
TIYEGQITAILGHNGAGKTTLFNILTGLTAPTSGTALIFGYDVRDSNDMRAIRSMTGVCP
QHDILFDLLTPREHLEFFAAVRGISRSMIRHEVKKTLKDIDLVEKADTFARYLSGGQKRK
LSVGIAIIGDPKIIILDEPTAGVDPYSRRQLWSLLQSRRHGKVILLTTHFMDEADILADR
KAVISKGKLRCCGSSLFLKNKFGIGYHLTLVLEGNAREHAINRLVMTHVGKAEKARRHGR
ELSFILPHNSVENFAPLFSAIENEIKTRSARLGISSYGVSMTTLEEVFLHLEKDEETECT
MDNLSKKMVRNRALSRSLSLQSKSTSYQSLQNEGVTVQADSQGKANDLPDGVHNDRNPPV
LGLGLDPIKIRPNFFQILYAMLRIRVLRLFRNLQLLYFTIIMPLALIALGLYLNSIRTVD
FRMESLKLDSRTYNETEIVYLNNTDHDITKLIDSIAQDAKHIEEYDGNFANLMNIAPHIA
AFNINDYSLPRLNLTVTYNDTMQHSLPILINILSNAYYRLISGKNEATPIEVKTHPFQQT
SQPQQFNVGAASCAILLGMVFILLPITLAVDMVYDREIKAKNQLRVNGLSFSMYFLSYFI
VLAGLMIFICLCILGIIFLFDVPSLREIPAVITLGILIMLYCPSSIVFCTCLSYIFDKLD
SAQSMLPNIATFFGMLPFILVMILDMQGLGGTASFALHVAFSLLNSMYVPYAAVYYVDRV
HLMCSINAACHYLVMSDYLTMEIILLAFGALVQCPVWFFVLVLLDINKSGGNVSDMFKRF
LRDGDTVREEIMENSDIGEHEDTDVKNERQKVFNFVVSPALAQEPPLVLLQNLRKEYRPK
ESGSSCCSKREEERKIAVRNLSLAVEPGEVLGLLGHNGAGKTTTMKIIIAEEVPTKGKVQ
ISGHNINTHMSDAFRQMGYCPQHDAQWKNITVREHLECYAAIRGVPWSDVDRIVDLYLSE
LQIHEHADKQSQECSGGTRRKLSFAMAMVGGPKVILMDEPSTGMDPRSKRFLWDTILASF
QGGRGVILTTHSMEEADALCSRVGIMVKGELRCIGSTQHLKNLYGAGYTLEMKLQGGDCT
PTTPSGDRIAGLKEFVAGLFSDATLEESFADRLVFAVPQHAVTSLADCFTQLEKAKLELD
IEEYSFSQTTLEQVFLKFSH
NT seq
5103 nt
NT seq
+upstream
nt +downstream
nt
atgaattcgtgcgcgctctacttcgcccaactgcgggcgatgctcgtgaggaatctcctg
ctgaagaaacgcgatacgcggaagacgtttatggaggtcgttctacccctctatatcctt
ggagccttgatcgtggtgaaggccatgatacccaacccaaactttcccgcgatgacgacg
cagaggcatgaaggagatatattcaaattattcaaaggctacaaaaacaacacgatcgcc
gtggtacccaattctacggaaaccctcagcttcttaaactacatgaatagcctctggcgc
tctatgttggattatcccgataagcttcccttaaactttatggtgttcgacacgaaggat
gatcttcaagcagcgtactggagagatccttacagcgtacccctagcagttatcttcgag
gaccccctgccaatatcacagcgtcttatatatgaaattaggacgaatccttcgtatacc
ttgcccgtatcgccaaccgaattgtattctgctccgatcagttgtcgaaagaataagacc
gggcactggatgggcgacattttatcgataaaaaccggggaatcctgtcccgtcaataat
tacttgcattccggcttcttggccttgcagatgataatggatatcacaaagataagatta
gatatgggaaattccgacgtgccgataccggatattaaactcataatgtttcccaaggaa
gcgtataccgctgactggatgttggccttcagagttgttattccgctttacatggtctta
gcgctctcgcagtttgtcacctatcttctgatcttaatagtcggcgagaaggaaaataag
attaaagagggaatgaagatgatgggcttaaacgattccgtgttttggttgtcttggttc
atcatctacagcattttcgtctttttgctttctgccgtcggagtggtgttactcttcaca
ctccaaatgtttcaacacacgcactttttaccgatattccttttggttgttctatacagt
ttctccgtgattatgtttgcctttatgatcacgccattcttcgacaagtcgcgcacggct
ggtgttttgggtaattttgctgtcacgatactgagcttgatgtatttcatccaagtattc
gtacgtgattcgagctcagtcacatactggttcgtttctttgatcagcccagccgccgtc
gccttggcaatggataaggctctagtgctggatctgcaaggtgagggagtcaatttcgac
aatctctggtccggcccagggatacctttcggtggcagcctcatcatgatgactttggat
atctttctgtatggctatctggcctattatctcgattccgtgataccaagtgaacatgga
actaagaggcccccttggttttgttttttacgtggatattggtgttcaaagaaggttcaa
agggtaccgtcatcgaacggcgagtcgaactcgttcattccgggcgaggaggcaaatcgc
gacgtggagccggtggtgcgcgagatgaagggccgcgaagcgatcaggatagccgacctc
tacaaatcgtttcacaagtgccggcgtccggagatcaaggcggtaaacggcatcaatcta
actatctacgagggacagatcaccgccattctcggtcacaacggcgctggcaagaccacc
ctcttcaacatcctcacgggcttgaccgcacctacatccggcaccgccctcatattcggt
tacgatgtgcgcgattccaatgacatgcgggcgatacgcagcatgaccggggtttgtccg
caacacgacattctttttgatttgctgacgccgcgcgaacacctcgagttctttgccgca
gtgcgtggcatttcacgctcgatgatacgacatgaggtgaagaaaaccctgaaagacatc
gatctagttgagaaagcggacaccttcgcgcgatacctaagcggtggacagaagagaaag
ctatctgtgggaatcgctatcatcggcgatcccaaaattattatcctcgacgagcctacc
gctggggtggacccttactcgaggagacagttgtggtcccttctgcagtcgaggcggcac
ggaaaagtgattttgttgacaactcacttcatggacgaggcggatatactcgccgacagg
aaagcagtaatcagcaagggaaagctcaggtgttgcggcagctccctatttttaaagaac
aaattcggcattggataccatttaacattagtcctagagggtaatgccagggaacatgct
atcaatcgattagtaatgacacacgtgggcaaagcagagaaggcgagacgtcacggtcgg
gaattgagcttcattctacctcataactccgtagaaaacttcgcaccccttttctccgct
atcgagaacgagatcaagactcgttctgccaggcttggcattagcagctatggcgtgtca
atgaccaccctggaggaggtattcttgcatctggaaaaagacgaggagaccgagtgcaca
atggataacctgtcgaagaagatggtacgcaatcgcgcgcttagccggtcgctttcgtta
cagtccaagagtacatcgtatcagagcttacagaacgagggggtaactgtacaggccgac
agccaaggaaaagcgaacgatttgccggacggtgtccataatgatcgaaatccacctgtg
ctcggtctcggcctagatcccatcaagattcggcctaacttctttcaaattctctacgcc
atgctacgtataagagtgctcagactttttaggaacctccaactgctgtatttcacgatc
atcatgccgctggctctgatagcgctcggtctctacctgaacagcatccggacggtcgat
ttcaggatggaatcgctaaaacttgatagccgtacatacaacgaaaccgaaattgtctat
ctaaataataccgatcacgacattaccaagttgatagacagcatagctcaagacgccaag
cacatcgaggaatacgatggcaatttcgcgaatttaatgaatatcgcaccgcatatagcc
gccttcaatattaacgattatagtttgccgcgactcaatctgaccgtcacatacaacgat
acgatgcaacattctcttccaatattgataaacattctttcgaacgcttattatagattg
atttcgggaaagaacgaagctacgccaatcgaagtcaaaacacaccccttccaacaaacg
tcgcaaccccaacagtttaatgtcggtgcggccagctgtgctatacttctcggcatggtt
ttcatattattgccgattactttagcggtggacatggtatatgatcgcgagatcaaagcg
aagaatcaacttcgcgtgaatggcctgtcgttctccatgtactttcttagctacttcatt
gtactagccggcctgatgattttcatctgcctgtgcattctcggcatcatattccttttc
gacgtgccttcgctacgggaaataccggccgtcatcaccctcggcattctcatcatgctc
tactgcccatcgtccatcgtcttctgtacatgtctcagttacatcttcgacaagttggac
tccgcgcaaagcatgttgccgaacatcgcgaccttcttcgggatgctaccgttcatactc
gttatgatcctcgatatgcaaggactcggtgggacagcttcattcgcgttgcacgtggcc
ttttccctattgaacagcatgtacgtgccatatgcggcggtgtactacgtagatcgcgtt
catttgatgtgctccatcaacgccgcctgccactatctcgttatgtctgattacctcact
atggaaatcatattgttggcttttggtgcgctggtgcaatgcccggtttggttcttcgtg
ctagtcttgctggacatcaacaagagcggcggcaatgtcagcgatatgttcaaacgtttc
ctgcgtgatggcgatactgttcgtgaggaaattatggaaaattcagatattggcgaacac
gaggacacggatgtgaaaaatgagcggcaaaaggttttcaattttgtcgtttcgccagcc
ctagctcaagaaccgccgttagtattgcttcagaacctgcgaaaggagtatcgaccaaag
gagtcaggatcgtcctgctgctcgaagcgcgaggaggagcggaagatcgccgtgcgaaat
ctctcgttggcggtggaaccgggcgaagtgctgggcctgctgggccacaacggcgccggc
aagactacgacgatgaaaatcatcatcgccgaggaggtaccaacgaagggcaaggtgcag
atcagcggccacaacatcaacacccacatgtcggatgctttccggcagatgggttattgt
ccccaacacgacgctcaatggaaaaacatcaccgtaagagagcatctggaatgctacgcc
gcgattcgcggggttccatggagtgatgtcgatagaatcgtggatctatatttgtccgag
ctacagattcatgaacacgccgacaagcagagtcaagaatgttccggcggaactagaaga
aaacttagtttcgcgatggcaatggtcggaggacccaaggtgattctcatggacgaaccg
agtacggggatggaccccaggtcgaaaagattcctatgggacacgattctcgctagtttt
cagggcggcaggggagttatattaactacccactccatggaagaagccgacgcgctgtgt
tcaagagtcggcataatggtgaagggtgaactgagatgcatcggttcgactcagcactta
aagaatctctacggtgctggctacaccctagaaatgaagctgcagggcggcgactgcaca
ccgacgacaccctccggcgacaggatcgccggtttaaaggaattcgttgccggcctcttc
tccgacgccactctggaagagagcttcgctgaccggttagtttttgccgtgccccaacac
gcagtgacctcgctagctgattgcttcacacaattggagaaagccaagctcgaactggat
atagaagagtacagctttagtcaaactaccctggaacaggtgttcctcaaattctcgcat
tag
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integrated database retrieval system
