Temnothorax americanus: 143900349
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Entry
143900349 CDS
T11456
Symbol
Usp39
Name
(RefSeq) ubiquitin specific protease 39 isoform X1
KO
K12847
U4/U6.U5 tri-snRNP-associated protein 2
Organism
tame Temnothorax americanus
Pathway
tame03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tame00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
143900349 (Usp39)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tame03041
]
143900349 (Usp39)
Spliceosome [BR:
tame03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP specific factors
143900349 (Usp39)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UCH
zf-UBP
UCH_1
zf-UBP_var
Motif
Other DBs
NCBI-GeneID:
143900349
NCBI-ProteinID:
XP_077267706
LinkDB
All DBs
Position
Unknown
AA seq
519 aa
AA seq
DB search
MGTAGTGQIPEMASDRRGAQLKRKLVDTGSDSDNETERNAKHVKTKSEAPRLCPYLDTIN
RQFLDFDFEKLCSVSLSRINVYACLVCGKYFQGRGTNTHAYTHSVAESHHVFLNLHTLKF
YCLPDNYEIVDSSLDDIKYVLNPTFDKMQIAQLDKSDKQSRAIDGSMYSPGIVGTNNIKA
NDYCNVILQALSHVTPLRDFFLRESNYFHVRRPPGDSSYLLVQRFGELMRKLWNPRNFKA
HVSPHEMLQAVVLWSKKRFQFTEQGDPVDFLSWFLNALHLALNGTKKRDSSIIYKTFLGH
MRIYTRKIPPLELEESQRSELLNTVEYGETVTESPFLYLTCDLPPPPLFKDQFTENIIPQ
VNLYTLLNKFNAVTEKEYKTYKENFMKRFEITELPPYLILYIKRFTKNTFFVEKNPTIVN
FPVKNVDFGDILTPEVKAKHPYTTYDLVANIVHDGEPGQGTYRVHILHRATGQWYELQDL
HVTQILPQMITLTEAYIQIYELKKDAHMENGDNKNKKTT
NT seq
1560 nt
NT seq
+upstream
nt +downstream
nt
atgggcactgccggcactgggcagattccagaaatggcgtccgatagacgaggtgctcag
ttgaaacggaaattggttgatactgggagcgactcggataacgaaacggaaagaaatgca
aagcatgtgaaaacgaaatcggaggcaccgcgactgtgtccgtacttggatacgattaat
cggcaatttttggattttgattttgaaaaattatgctccgtatcactgtccaggatcaat
gtatacgcttgtctggtttgtggcaaatacttccaaggcaggggaaccaatacccacgct
tacacacacagcgtggcggagagtcatcacgtctttcttaatttacacacgctcaaattt
tattgtttaccagataattacgagatagtggattcgtccttggatgatatcaaatatgtg
ttaaatccaaccttcgacaaaatgcagatagcccaattagacaagagcgataagcagtct
agagcgatcgacggctctatgtattcgcctggaatagtaggcacgaataacataaaagcg
aacgattactgcaacgtcattttacaagcgctttcgcacgtgacacctctgagagatttc
tttttacgagagtccaactatttccacgtaaggagaccacccggtgattcgtcgtatctt
ttggtacaaaggttcggagagcttatgcgcaaattgtggaacccacgtaatttcaaagcg
cacgtaagtcctcacgaaatgctgcaagcggtagttttgtggagtaaaaaaagatttcag
ttcacggagcaaggcgatccggtggattttttatcgtggttcctaaatgctctccatctg
gcgttgaacggtacgaagaagcgtgattccagcataatatataaaacatttttgggtcat
atgcggatatatacgcggaagattccgccgttggaattggaagagagccaaagaagcgaa
ttattgaacacggtggagtatggcgagactgtgacggaaagtccatttttatatctcact
tgcgatcttccgccacctccattatttaaagatcaatttacggagaatattattccacag
gtaaatctgtacacgcttttgaacaaatttaacgccgtcactgagaaagaatataaaact
tacaaggaaaatttcatgaaaagatttgagattaccgagctgccaccatatctcatactt
tacataaaaagattcacaaaaaatacattttttgttgaaaaaaatccaacaattgtgaat
ttccccgttaaaaatgtcgatttcggagatattttaacaccggaagtaaaagccaagcat
ccgtatacaacgtacgatctagtagccaatatagtacacgatggcgaacctggtcaagga
acgtatagagtccatattttgcacagagccactggtcaatggtacgaactgcaagatttg
cacgtcactcaaattttgccccaaatgatcactctcaccgaagcatacatacagatttat
gaattaaagaaagacgcgcacatggaaaacggagataataaaaataaaaaaactacgtga
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