Temnothorax americanus: 143901535
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Entry
143901535 CDS
T11456
Name
(RefSeq) superkiller complex protein 3 isoform X1
KO
K12600
superkiller protein 3
Organism
tame Temnothorax americanus
Pathway
tame03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tame00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
143901535
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tame03019
]
143901535
Messenger RNA biogenesis [BR:
tame03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ski complex
143901535
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_2
TPR_16
TPR_19
TPR_14
TPR_CcmH_CycH
TPR_1
TPR_8
TPR_17
CFAP70_TPR_C
TPR_12
TPR_11
CFAP70_mid_TPR
TPR_7
CABIN1_N
ARM_TT21_C
ANAPC3
TPR_9
TPR_21
PknG_TPR
DUF7017
BTAD
Alkyl_sulf_dimr
TPR_20
TPR_15
TTC22_N
DUF5588
TPR_SusR
RAP80_UIM
TPR_10
Motif
Other DBs
NCBI-GeneID:
143901535
NCBI-ProteinID:
XP_077270060
LinkDB
All DBs
Position
Unknown
AA seq
1300 aa
AA seq
DB search
MSDDIKILLKEARESFKQNEYLEVMKKCKKVLKKDKSNYAALVLLARSMQEVEEFKSQVS
LVLQKAVEVQPNNPLAWQGLAAHYEKAPQDHDNWKKLALAYCKLLQLDSDSPKFTHFVNK
ISEIILRIKNDDVLSEALNTLSTLREVSTKQKINLIDKTLVWVLSEYPNDRINDHQELYE
NVLASVIKDVELMNRQEYYRKYLKMLYDSNKFTALLAAAQDMHVQFSQDACPLEWLCRIY
YENAALSENELEIDITQFYEPLFKLSTNSDVALIAKAAYLKRKDELIDSRDCLKKVVSLN
AQSFYAWLMLSQIHYDLYCWEETENACRKALQLIKPCLKDKFQQGIELRLLEAISRSSNK
EKLVEARQMCEELLSIEPSIQLRVIHARTNILLDEPDVTAIINNLESQDETKLQAFVLKA
LHLKEHKHYQEAVNILELALENSEAWLLFGKIYWDMEDYNSSLVAFLNGVQSDRNNWECM
LYLGRYYREHSNDIERSRKCYHTALQINPNSEEAGIGLSTAYRLLKDTAANIRLLHRVTK
QGTGPRWAWLQLGLHYLDEGDAGQAITALQHVIRADPNDNHSWESLADAYLARGAHTSAL
KSYQRALQLRPGSLYPMIQLANIKLLIGQHKEAKEAFESILQNDERHILALKGLAQACIG
LAKENIAKQFLCRARENLQQAADSLVDVIMIRNDLLCNYKLLGDVCYRIVTLPEKYCYLR
IKPNAFSLAMMNCDSTEKYVNIKGDEILMLSIGYFSRIISMQNSASLWHDLTCCYLMQLN
RATTVNKSDVAIKCLEAAKRSIKLCPQSWLHWNILGVICMSVYVKNYALAQHCYVMAIER
ESNNATAWSNLGTLYLYLGDIYKANEAFSRAQRADPSYVNSWVGQGLIAEKILRKEAMDL
FRHSTQLGYHNQAALGYAHWVLTTLLSPAMKKDPLLIYFIENMHAIPAASDVLTWYLERE
PYDVYALNTHGLLLERLKLYNTAAKQFAMALKLSEDEERDMISINLARILIQIGKYEEAV
GLCKQVKCANFNSQCHLALSLFKAKQYEESYDTYEAALHWLADTSADKANILCAMATIAY
MFQGADAVKTLLFQCIQIKPPIVAGFLATAALGILHDDVNLTSLVLNELKSYENHHEYGY
HVVILSAYHQVIQGNLTQATRILTKAIFRHPNDVRYWVRLVRVLLLDEDLNIFRKCALTA
LTLSRNTSMTDIVYVACASAYSHFGTKEGLRQAQKNIFTYPSNVESWANFVAALLSRNKD
CAPINNQWILSLISLMKSQFQTSENMSRWLFHKERELDNL
NT seq
3903 nt
NT seq
+upstream
nt +downstream
nt
atgtcggatgacataaaaatcttgttgaaggaggcccgcgagtccttcaagcaaaatgaa
tatctggaagttatgaagaaatgcaagaaggttttgaagaaggacaagagcaattatgcg
gcgttggttctgttagcacgttccatgcaagaggtggaggaatttaaatcgcaggtgtcc
ttggtccttcaaaaggccgtggaggtgcaaccgaataatccgttggcctggcaaggatta
gcggcacattatgagaaggctccacaggatcacgacaactggaaaaagttggctctagcc
tattgcaaactgttgcagttagatagcgactctcctaagttcacgcatttcgtgaataaa
atctctgaaattatcttgcgcatcaaaaatgatgatgtcttgtccgaagcgttgaacaca
ttgagcacgttacgagaggtttctaccaaacagaagatcaatctgatcgataagaccctg
gtatgggttttatcggagtaccctaatgatagaataaacgatcatcaggagctttatgaa
aatgtgttggcgtctgtaataaaagacgtagagctaatgaatagacaagagtattacagg
aaatatttaaaaatgttgtatgattcaaataaatttacagcgttgttggcagccgctcaa
gacatgcatgttcaattttcacaggatgcttgtcctctagaatggttgtgccgtatctat
tacgaaaacgctgcactgtctgaaaatgagcttgagatcgacataactcagttttatgag
ccgcttttcaagctgagtacaaattccgatgttgcgcttatcgcgaaagcagcatatttg
aaaagaaaggatgagttaatcgattcacgcgattgcttgaaaaaagtagtctcgttaaat
gcgcaatcgttttatgcttggttgatgttaagccaaatacattatgacctctactgttgg
gaagaaactgagaatgcttgtagaaaagcgctacaattgataaaaccctgtttaaaggat
aaatttcaacagggaatcgagttgaggttgcttgaagcgataagcagaagtagcaacaaa
gaaaaattggtggaagcgcgtcaaatgtgcgaagagctgttaagcattgagccttccata
caattgcgagtgatacatgcacgcacaaatatattactggatgaaccagatgttactgct
ataataaataacttggaatctcaggacgaaactaagctccaagcttttgttcttaaagcg
ttgcatctaaaagagcacaaacattatcaggaagctgtaaacattctcgagctagcttta
gaaaattctgaagcttggttgctgtttggtaaaatatattgggatatggaagactacaac
agcagtctggtggcattcttaaatggcgtacaatcggatcgcaataattgggaatgcatg
ctttacttaggacgttattaccgtgaacatagtaacgacatagaacgatcaaggaaatgt
tatcacaccgcgttgcagatcaatccgaattccgaggaagctggtattggattgagcaca
gcttatcgtcttctcaaggataccgctgccaatatccgattgttacacagagtaactaag
caaggtactggaccgagatgggcttggctccaactgggtttgcattatttggatgaaggt
gacgcggggcaagctattacggcattacagcatgtgatcagagccgatcctaatgacaat
cacagctgggaatctctggcggatgcgtacttagcacgcggtgctcacacatcggcactg
aaatcgtatcaacgtgcgctacagttgagaccaggatccttgtatcccatgatacaacta
gcaaatatcaaactactcattggtcaacataaagaagccaaagaagccttcgagagtata
ttgcagaacgatgaacggcacattcttgcattgaagggtctagcacaagcgtgtataggt
ttggcaaaggaaaatatcgcgaaacaatttctatgtcgcgcgagagaaaatctacaacaa
gcagcggacagtttggtagatgttattatgatacgtaatgatctactttgcaattacaaa
ttgctgggagatgtatgctatagaatagtcactctgccagaaaagtattgctatttaagg
attaagccaaacgctttctctttggcgatgatgaattgcgacagtactgaaaaatatgtg
aatattaaaggagacgagatactcatgttgtcaatagggtattttagccggataatatcc
atgcaaaattctgcatcgttatggcatgatttaacctgctgttatttgatgcaactaaat
cgcgctactacagtcaacaagagcgacgtggcgattaagtgccttgaagctgcaaaacgt
tccattaaactctgcccgcaatcgtggctacattggaatattctgggtgttatttgtatg
tcagtgtacgtaaaaaattatgctctggctcagcattgttacgttatggcgatcgaaaga
gagtcgaacaatgcaacagcttggagcaatttgggaacattatacttgtatctaggagat
atctataaagcgaatgaagcattttctcgagcgcaacgtgcggatcctagttacgtgaat
agctgggtcggacaaggattaatcgcggaaaagatcctgaggaaggaagcaatggatctg
tttcggcattcgacgcaactgggttatcacaatcaagcagctttaggctatgctcattgg
gtgcttactactcttctgagtcccgcaatgaagaaagatccactgttgatttattttatc
gagaacatgcacgcgatacctgcagcatctgacgttctcacttggtatttagaacgcgag
ccgtatgatgtttatgccctgaatacccatggcttattattggaacggctgaaattatac
aacacggcggctaaacaatttgctatggctttaaaactgagcgaggatgaagaaagagat
atgatatccataaacttggcacgcatcctgattcaaatcggaaagtacgaagaagcggtg
ggattgtgcaaacaagtgaaatgcgcaaatttcaattctcagtgccatcttgcattatcc
ttattcaaagccaagcagtacgaagaatcgtacgatacatatgaagcagctttacattgg
ctagcagacactagtgcggataaagcgaatatcttgtgcgcgatggccacgatcgcttac
atgtttcaaggggcagatgctgtcaagaccctgctattccaatgtatacaaataaaaccg
cctattgtggctggtttcttagcgactgccgcgttaggaattttacatgacgacgttaat
ttgacttctttggtactgaacgaattaaaatcatatgaaaatcatcacgagtatgggtat
cacgtcgtcatactgtcagcataccatcaagttattcagggaaatctcactcaagctaca
cgaatactcaccaaagctattttcaggcatcctaacgatgttagatattgggtacgcctt
gttcgagttttattgttggacgaagatctgaatattttccgtaaatgtgctctaacggcg
ttgacgctaagcagaaatacgtctatgaccgatatcgtatatgtagcttgcgcatcagcg
tacagtcacttcggcacgaaagagggtcttcgacaagctcagaaaaatatatttacatat
cccagcaatgttgagagctgggctaatttcgttgcagctcttttatccagaaataaggat
tgcgctccaattaataatcagtggatattgtcgctaatatcattaatgaaatcgcaattt
caaacctctgaaaatatgtcacgatggttatttcataaggagagagaacttgataatctc
taa
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