Temnothorax americanus: 143901972
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Entry
143901972 CDS
T11456
Name
(RefSeq) DEAD-box helicase Dbp80-like
KO
K18655
ATP-dependent RNA helicase DDX19/DBP5 [EC:
5.6.2.7
]
Organism
tame Temnothorax americanus
Pathway
tame03013
Nucleocytoplasmic transport
tame03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
tame00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
143901972
03015 mRNA surveillance pathway
143901972
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tame03019
]
143901972
Enzymes [BR:
tame01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
143901972
Messenger RNA biogenesis [BR:
tame03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
143901972
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
AAA_30
Motif
Other DBs
NCBI-GeneID:
143901972
NCBI-ProteinID:
XP_077270769
LinkDB
All DBs
Position
Unknown
AA seq
481 aa
AA seq
DB search
MASTKVDWGQYADEQDKLASKVTSLNLDKPNSTPVPTPSVKDGDVKSDDDTSEEQISPSE
KSLLQKIIRKGLVETTKAVEVQRKDPNSPLYSVKTFDALHLKPALLKGVYAMGFNAPSRI
QETALPTLLADPPQNMIAQSQSGTGKTAAFVLAMLSRVDPTKDYPQVLCLSPTYELAIQT
GEVAARMSRFCPEIKIKYAVRGEEISRGSNITDHIIIGTPGKVLDWGQKFKFFDLSKISV
FVLDEADVMIATQGHQDQCIRIHKLLPRTCQMMFFSATYEPEVMNFAEIIVSNPLIIRLL
REEESLDNIKQYYIKCKTLDEKYTAITNIYGVITIGQAIIFCHTKNTASWLAEKMTKDGH
AVAILSGDLTVEQRISVLDRFRAGLEKVLVTTNVLARGIDVEQVTIVVNFDLPMDQKKQA
DCETYLHRIGRTGRFGKSGIAINLIDSPKAMQLCKDIERHFGKKIHYLDAEDADEIEKIG
V
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
atggcttcgactaaggtcgactggggacagtacgccgacgaacaggacaaattggcatcg
aaggtgacgagtttgaacctggataaaccgaactcaacacccgtccctaccccatctgtg
aaagatggagacgtcaagagcgatgacgatacgtcggaggagcagatctcaccgtcggaa
aagtcgctcctgcagaaaattatcaggaaaggattggtcgagacgacaaaggctgtagag
gttcaaaggaaggatccaaattcaccattatacagtgtcaaaacctttgacgcacttcat
ctcaaacctgccttgttaaaaggtgtttacgctatgggattcaatgcaccctcgagaatt
caagaaaccgctttacccactttactcgccgatccgccgcagaacatgattgcgcaatcc
caatctggtacgggtaagacggccgcgttcgtactcgctatgttgagtcgggtagatccc
acaaaagattacccacaggtactttgtttatcgccgacttacgagctggcgatccaaact
ggcgaagtagcggcgaggatgtcgcgcttttgccctgagataaaaataaagtacgctgtg
agaggagaagaaataagccgtggatcgaacatcaccgatcacattattataggaactccg
ggtaaagtgcttgattggggacaaaagttcaaattctttgatctaagcaaaatatcagtg
tttgtattggatgaagctgacgtcatgatcgctacacaaggccatcaagatcagtgtatc
cgtattcacaaattactgccacgtacatgtcaaatgatgttcttctctgcgacatacgag
ccagaagtgatgaactttgcggagattatagtcagtaatccgctaataatacggttatta
agagaagaagagagtttggataatattaaacagtactatatcaagtgcaaaacgttagac
gaaaaatatacggctatcactaatatctatggcgtgatcaccattggacaagcgattatt
ttctgtcacacgaaaaatacggccagttggttagcagagaaaatgacgaaagacgggcat
gcggtagcaatattgtctggggacttgacagtcgaacaaaggatttctgtgctggataga
tttagagcaggacttgagaaagttcttgtcactacgaatgttttagctagaggcattgat
gtagaacaggtgacgatagtggttaattttgatttgccgatggaccaaaaaaagcaagcc
gattgtgagacgtacttgcacagaatcggaagaacagggcgattcggcaaatcggggatc
gccattaatttaatcgactcgccgaaggcaatgcaactgtgcaaagacatagagaggcac
tttggcaagaagatacattatcttgacgcggaagatgcggatgagatcgaaaaaatcgga
gtttag
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