Temnothorax americanus: 143903943
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Entry
143903943 CDS
T11456
Symbol
Nup188
Name
(RefSeq) nuclear pore complex protein Nup188
KO
K14311
nuclear pore complex protein Nup188
Organism
tame Temnothorax americanus
Pathway
tame03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
tame00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
143903943 (Nup188)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tame03019
]
143903943 (Nup188)
Messenger RNA biogenesis [BR:
tame03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
143903943 (Nup188)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nup188_N
Motif
Other DBs
NCBI-GeneID:
143903943
NCBI-ProteinID:
XP_077274210
LinkDB
All DBs
Position
Unknown
AA seq
1928 aa
AA seq
DB search
MEVAPMGNLPCSKDLWSIVSGTTCCCAKETVEEEIKNATVLLKEGLQFFKPYTDVSLQSI
SKRDPPPLRQMYDLISKLAPLLNLDATITWDLVCNFVSYEYRNCAETFASQLSDLTSIRA
LIDDIWNFYYSERVTLIKCLKLMIEYKDNERHPHRKEFVNFFNEILMGNLLESIRKQIEA
LKFVNPPTRSQFCTEDHLHRLYNSTLIEMRELLHILTVIVHDIHIPSYEFAKFYGSIGGE
PRRLVSTKSHEDKEAVAKKVEEIQYSQIALLLVTLDIDKHTGMEDWINGVGSNMREIFEH
KCVRESSPRDGPLLLSWMLANYSIDPDNLDTLNRFRPFGIKAIQLDVFQYLRDMINCEMF
REETHYAEVVRSSVYNLLSLVCVFVDEDRLSALNGIFDALATIVKFPECAARFWDEPGDS
IRSIYKVAKELYPYKFEPLTNIAIGLASTTITSAKKIASELDNLQTVTIEVPRRRDHSKP
LRPYEADCIIQKNSFTITNNCVRENIAVLSNEKEVVLFRTEASYWNALHHKIEQLFSQAS
GGIANISAVKTDLPENVCQGLKLVEALLAKNIDIPSSMVIPTELSFEIINRFSYPTLPPN
LYRIVAVCISISSKLVLRYPEDILSRMRSGIYPKFNNWYQKPLDFAEAISFDSGLIASWL
SGIETIEHTYPILRAFLDTLYNYLITKHSREAMYTIEIPGMVFLLQAVLPKLDSWYFESN
AERIDLWLKSMFCIHRALDSTLPKNDIRNELQLVVVYSLLYLEPRHALLKLLRTGERTLH
NKMITETNWINGKGFKTIKSVELALSIVNRLLMFRKSLNLELSDRSPLEIALYSSPRVPN
GLLIVPTIVNYLYVWFSPSLQKMAVRLLKKFAEEFSMSLLVCMGMDGTSIRETFAFRLTL
PTCAIEVKVAILELVAVCLEKQPGLTEALFNIMHQAERKRIFPRSADEFLTEGCSQFLDS
YLDRMYKEDDIVCDKLYDGTMTVLRAMWYHRNEILVNFFRKRDKFWSHLFAPLFKTLVAD
AKGYSQLLDVITLELYKSPLLENNFSKSLKELLDKSKDHWKKLAMYVLDVPANGDGENKE
PRTKQDRLIEPLYEINLESWYHFIVMLTDDRTAKNYPINVTQAHLLTQLALDSLLERVKE
PNDSSSGKIPMLLASLSLRCITSWKQMCVGDSRIFKTRLSQLTQEIAQTYRGFGKALRQT
MISLLLGCVQLVKSTLAEDSAILEYLLAHSCTIAICELEELKEAALQLEHRKQRFSVEFK
TDEKGTQKKADCHSAETLRGIRESLPATLAISMVTQLLRSYVERNANFKHRLRASCVQLR
QMIPELMVCVGCTLQKYPYLKFSAAALSLLGVISRSPYCSYPINDNDVAKLWFNLIPPTD
ISNSMLDSLYDDSANGQWRCQDWWPLYTLGLEFLIGLVSSETHMMFVNHIVVFLNSHEHQ
LMVVSTLLRHTADLLAADLIQSLVALIHAIATQTYVWNSIQPSVRETLIKCMYLAYDSTV
NLLLRPRILKFIIDGISVESAEELESCDNRLPSGELKLLVNKLIVINTTCALSFVHFSPK
LNTLVDTIYTQDYWYTPMAEMNFGPPQMSMSSGPQLTYGTIISSTQLFTQALHSRSQPVA
VSLPASSTPQSGREDKTDSAKKEWERAAPENLRRMHTSKDLRRIIHAASASTSRTSSNIG
GEFLGYVSGLDVTVSLLSSPRLLRRPYDPLICENTILSRATALATGRHVTKSGGSGAPGA
PGNSSPIIARNHRFSDPWFESMDENNTRLALEINLILILSQALEGVKSPRLTLRDRQLIA
RETATELGVFFDFLEHRGTPDIWQVKGSLIDADTRSSRTIQDTSDRTQTNLPARLQKDST
IDKAPVCSPDHENSSTEMNQTETREKRLDDSVLTTGVFKTNVSSVQFLPLMGKLLKTVVE
SLDSAQFR
NT seq
5787 nt
NT seq
+upstream
nt +downstream
nt
atggaagtagctccaatgggcaacttgccttgcagcaaggatttgtggtctatcgtatct
ggtacgacatgttgttgcgctaaagaaactgtcgaagaagaaataaagaacgccactgtc
ttacttaaagaagggcttcagttttttaagccatatacagatgtatcgttgcaaagcatt
tctaaaagagatccaccccctctacggcaaatgtacgatttgattagtaaacttgctccg
ctccttaatttggatgccacaattacctgggatctagtgtgtaattttgtgtcctacgaa
tacagaaattgcgccgagacttttgcgtcgcagctctccgatcttacgtctattagagca
ttgatcgatgatatttggaatttttattactccgagagagtgaccttgataaaatgcctt
aaacttatgattgagtataaagataacgaaagacatcctcatcgcaaagaatttgtaaac
ttttttaatgagattctgatgggaaacttacttgaatctatacgaaaacaaatagaagcg
ttgaagtttgtgaatcctcctacgcggtcgcagttctgcacggaagatcatttacatcga
ttatataatagtactttaattgaaatgcgcgagctgcttcatatattgaccgtgattgta
catgacatacatattcctagttacgaatttgccaagttttatggtagtattgggggtgaa
cctagacgattagtcagtacgaaaagccacgaagacaaggaagctgtcgctaaaaaggtt
gaagaaatacagtacagtcaaatagcattattacttgtaacactggatatagataagcat
accggcatggaagactggataaacggtgtcggaagcaatatgcgagagatctttgagcac
aaatgtgttcgtgaaagttcaccacgagatggaccgttacttctgtcgtggatgctagca
aattattcgattgatccggacaacttagacacgttgaatcgtttcagaccatttggcatc
aaagccatacaacttgacgtattccagtatctgcgagatatgataaattgcgaaatgttt
cgagaagagacccattatgccgaagttgtgcgaagcagcgtttataatcttctctcttta
gtgtgtgtctttgtcgatgaagatcgattaagtgctttaaatggtattttcgatgccttg
gctaccatagtcaagtttccagaatgcgcagctagattctgggatgaaccaggtgatagc
atacggtcgatttacaaagttgccaaagaattatatccttacaaattcgaaccgttaacc
aatatagctattggtctggcatccacaacaattacgagtgccaaaaagatcgcgtcggag
ttggataatctacaaacagtgactatagaagttcctcgtcgaagagatcatagtaagccg
ttacggccatacgaagcagattgtataattcaaaagaactcgtttaccataacgaacaac
tgcgtacgcgagaacattgccgtgttgtccaatgagaaggaagtagttttgtttcgtaca
gaggcaagttattggaatgctttgcatcataaaatagaacaattattttctcaagcgagt
ggcggaattgcaaatatcagcgcggtgaagactgatttgccggaaaatgtttgtcaaggt
ctgaaattggtcgaagcgttattggctaaaaatattgatataccatcgagcatggttatt
cccacggaattaagtttcgaaattattaatcggttctcatatccaacactgccaccgaac
ttgtacagaatcgttgccgtctgcatcagcatttcatcaaaattggttttgagatatccc
gaagacattctctcgcgaatgcgatctggtatttatccaaaatttaataattggtatcaa
aagccgttagactttgcggaagcgatttcctttgacagtggtctcatcgcgtcgtggctc
tcaggtatagaaaccatcgaacatacgtatcccattctacgggcgtttctagacacattg
tacaattatctaatcaccaagcatagtagagaagccatgtacaccattgaaataccaggc
atggtatttctgctacaagctgtattacctaagttggactcctggtattttgaatcaaac
gcagaaagaatcgacttgtggctgaagagtatgttttgcatccatcgagctctggactca
actttacctaaaaacgatattcgcaacgagttgcaacttgttgtagtatacagtttgctc
tacttagaaccgcgtcatgcgctgctaaaattacttcggacgggcgagcgtacgttgcac
aataaaatgatcacggagacaaattggatcaatggaaaaggattcaagactatcaagagt
gtagaactagctctgtcgatagtcaatcgactgttaatgtttagaaaatctctaaatcta
gaattgagcgaccggtcgccccttgaaattgctttgtattcctctccgagagtacccaat
ggacttcttatagtaccaaccattgttaattacctgtatgtttggtttagcccttcgttg
caaaaaatggctgtaagattgttaaaaaaattcgcggaggaattctccatgtctttgctc
gtttgcatgggaatggatggaacgtctatacgagaaaccttcgcatttcgattaactctg
ccgacgtgcgcgattgaggtcaaagtcgctatcttggaattggttgccgtgtgtctggag
aaacaacctggcttaacggaagctctcttcaacatcatgcatcaagcagaacgcaagagg
atctttccacgttcagccgatgaatttcttactgagggttgcagtcaattcttggactca
tatttagaccgaatgtacaaggaagacgacattgtgtgtgataaattgtacgacggcacg
atgacggtattgcgcgccatgtggtatcacagaaatgagattcttgtcaattttttccgg
aaacgagacaagttctggagccacctattcgcgccgctttttaaaactttagtggcggat
gcgaagggttattctcaattgttagatgtaatcacattagaattgtacaaaagcccattg
ttagagaataatttctcgaaaagtctaaaggagctgttggacaagtctaaggatcattgg
aaaaaattagctatgtatgttctggatgttcctgcaaatggcgatggcgagaataaagaa
ccgcgtacaaagcaagatagactgatagaaccattgtacgaaattaatttagagtcttgg
tatcactttatcgttatgctcactgacgatcgaacggcgaaaaattatccaattaacgta
acacaagcgcatcttttaactcagctggccttggattctctattggagcgagtgaaggaa
cccaatgattctagcagtggcaagattccgatgttgctggcttccttatccctgaggtgc
atcacttcgtggaaacagatgtgcgtcggtgactcgaggatttttaaaaccagactgtcg
caactcacgcaagaaatagcgcagacttatcgcggctttggaaaagccctgcgacagaca
atgatctcgttgctgcttggatgcgtgcaactggtcaaaagtactttagccgaggattcg
gcaatcctggaatatcttttagcgcactcttgcacgattgctatttgtgaactagaggaa
ttgaaggaagctgctcttcaattggaacaccgaaaacagcgattctctgtcgagttcaag
actgatgaaaaaggtacgcaaaagaaggccgattgtcacagcgcggagacactccgcggt
atacgagaaagtctaccagcgacgttagctatcagcatggtgacgcaattgttacgatca
tacgtcgaacgaaatgccaatttcaagcatcgtctaagagccagttgcgtgcaacttcgt
cagatgatacctgaactgatggtatgcgtcggatgtacacttcaaaaatacccatatctg
aagttcagcgcagcggcactaagcttgttgggtgttatatcacgttcgccatactgttca
tatcctatcaacgacaatgacgtcgcgaaactctggttcaacttgattccaccaacagac
atctccaacagtatgctcgactcgctgtacgatgattcggcgaatggtcaatggcgttgc
caggattggtggccgttgtacaccctaggcttggaatttctgataggtctggtcagcagc
gagacgcacatgatgtttgttaatcatatagttgtttttttaaattctcacgagcaccaa
ttaatggtggtatccacgttattgaggcacactgccgatctactggccgctgatcttata
caatcactggtcgctcttatacatgctatagccacgcaaacatacgtgtggaattcaatt
caaccaagcgttcgcgaaactcttatcaagtgcatgtatctggcgtacgatagtacggta
aacctgttgctgaggccgcgaatactcaaattcatcattgatggtattagtgtggagagt
gccgaagagctcgagtcctgcgataatcggttgcctagcggcgaattgaaactactggtg
aacaaactgatcgtcataaacacgacctgcgcactaagcttcgtccacttttcgccaaag
ttgaataccctggtagatacgatatatactcaggattactggtatacgccgatggccgaa
atgaactttgggcctccgcaaatgagcatgagctccgggccacaacttacttatggcacg
atcatcagctcgacgcaactgtttacccaggctcttcactctcgctcgcaacccgttgct
gtttcgttgcccgcatcttcaacgccgcaatctggacgtgaagataaaacggattctgcg
aagaaggaatgggaacgcgccgcgccagaaaatctccggcgtatgcatacgagtaaggat
ttacgacgaatcattcacgcagcctccgcttcaacctccagaacgtcatccaacattggc
ggagaattcctaggatacgtcagcggtctagatgtcaccgtgtcattacttagcagtcct
agactcttgcgtcgaccctacgatccattgatatgtgaaaataccattctttcgagagca
accgctttggcaaccggtagacacgtcacgaagagtggcggtagtggggctcccggcgct
ccgggtaacagtagcccaatcatagcaagaaatcacagatttagcgatccatggtttgag
tctatggatgagaacaatacacgattggcattagaaatcaatcttatcctgatactgtca
caggctctggaaggagtgaaaagtcccaggcttactttgcgagatcgtcagcttatagca
cgggaaaccgctaccgagctaggagtcttcttcgattttctcgaacaccgcggcactccc
gatatctggcaggtgaagggttccctgatagacgcagatacaagaagttctaggacgatt
caggatacgagtgatcggacgcaaacgaatttaccagcgagactccagaaagatagtact
attgacaaagcaccggtgtgctcacccgaccacgaaaattcttcgacggagatgaaccaa
actgaaacacgagagaaaagactcgatgacagtgttctcactactggcgttttcaaaacg
aatgtcagcagcgtgcagttcttaccattaatggggaaattactgaagacagttgtcgag
tcgttggactcggcacaatttcgatga
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