Temnothorax americanus: 143904392
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Entry
143904392 CDS
T11456
Name
(RefSeq) pre-mRNA-splicing factor RBM22
KO
K12872
pre-mRNA-splicing factor RBM22/SLT11
Organism
tame Temnothorax americanus
Pathway
tame03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tame00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
143904392
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tame03041
]
143904392
Spliceosome [BR:
tame03041
]
Complex B
Other components
Prp19-related factors
143904392
Complex C
143904392
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
STL11_N
zf-CCCH_RBM22
RRM_1
zf_CCCH_4
RRM_occluded
Torus
RRM_YTH1
zf-CCCH_2
zf-CCCH
Nup35_RRM_2
zf-CCCH_4
zf-CCCH_10
RRM_3
DUF5092
zf-CCCH_PARP12
Motif
Other DBs
NCBI-GeneID:
143904392
NCBI-ProteinID:
XP_077275171
LinkDB
All DBs
Position
Unknown
AA seq
429 aa
AA seq
DB search
MATSKTTNTYNRQNWEDAEFPILCQTCLGDNPYIRMTKERYGKECKICMRPFTVFRWCPG
ARMRFKKTEVCQTCSRVKNVCQTCLLDLEYGLPIQVRDAALKIKDDLPRSDVNKEYYVQN
IDNEIGKIDPTTPAGAVGKSAAASDLLMKLARTSPYYKRNRPHICSFWVKGECKRGEECP
YRHEKPTDPDDPLADQNIKDRYYGVNDPVADKLMRRAAAMPKLDPPEDKSITTLYIGNLG
DVLTEKQLRDHFYQYGEIRSVTMVPRQQCAFIQYTQRSAAEAAAERTFNKLILGGRRLTI
KWGRSQGRQTVSAAEATREILEPVPGLPGALPPPPPESMGNNFFNLQPTPGGGTIPPMMI
PPPPVAPQFMFPPQMATAAAAVAAAAAAAAAAAAATPIFPPGTTPIHYPSQDPSRMGASQ
GVGKPWPEE
NT seq
1290 nt
NT seq
+upstream
nt +downstream
nt
atggctacgtcaaagactaccaatacgtacaacagacaaaattgggaggatgcggagttc
ccgatactgtgtcagacgtgcttaggagacaatccgtacattcgtatgacaaaggagaga
tatggtaaggaatgcaagatatgtatgcggccgtttacggtgttcagatggtgtccggga
gcgaggatgagatttaagaagaccgaagtctgtcagacgtgcagtcgcgtgaagaacgtc
tgtcaaacgtgtctattggatttggagtacggcttgccgattcaggttcgcgacgccgct
ttgaaaattaaggacgatttaccacgttcggatgtaaataaggagtactatgtacaaaac
atagacaacgaaattggaaagatcgacccgacgacgccggccggcgcggtcggcaagtcc
gccgcggctagcgatctgctgatgaagctggccaggaccagtccgtattacaagaggaac
aggccgcacatttgttcgttttgggttaagggcgagtgcaagagaggcgaggaatgtcct
tatcggcacgagaagccaacggatcccgacgacccgttggcggatcagaacattaaggat
cgctattacggagtcaacgatccggtggcggataaactgatgcgcagggcagcggccatg
cctaagctggacccaccggaggacaagtccatcacgacgttgtacatcggcaatctgggc
gacgtgctaacggagaaacagctgcgcgatcacttctatcagtacggcgaaatccgctcg
gtgacgatggtgccgcgtcagcagtgcgccttcatccaatacacgcagagaagcgctgcc
gaggcggcagccgaaaggacgttcaacaagctgatattaggtggaaggcggctcaccata
aagtggggccgttcgcagggaaggcagaccgtgtccgcggcggaagcgacgagggagatc
ctcgagcctgttccaggtttacctggcgccttaccgccaccaccgcccgaaagcatgggt
aacaacttcttcaatctgcaacccacccccggcggcggcacgataccgccgatgatgatc
ccaccgccgccggtcgcccctcagtttatgttcccgccgcaaatggcaaccgcggccgcc
gcggtcgccgccgctgccgccgccgccgccgccgccgcggccgcgacacccatcttccct
ccgggaacgacccccattcattatccgagccaagatccgtccaggatgggtgcgtcgcag
ggtgtgggcaaaccttggccggaggagtaa
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