Temnothorax americanus: 143905217
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Entry
143905217 CDS
T11456
Symbol
Vps16a
Name
(RefSeq) vacuolar protein sorting 16 isoform X1
KO
K20180
vacuolar protein sorting-associated protein 16
Organism
tame Temnothorax americanus
Pathway
tame04140
Autophagy - animal
tame04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
tame00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
143905217 (Vps16a)
04148 Efferocytosis
143905217 (Vps16a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tame04131
]
143905217 (Vps16a)
Membrane trafficking [BR:
tame04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
143905217 (Vps16a)
Hops complex
143905217 (Vps16a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vps16_N
Vps16_C
Beta-prop_WDR19_1st
PipB2_N
Beta-prop_Vps41
YlzJ
Motif
Other DBs
NCBI-GeneID:
143905217
NCBI-ProteinID:
XP_077276601
LinkDB
All DBs
Position
Unknown
AA seq
829 aa
AA seq
DB search
MSAMLTADWFPLGRDVYFRKFELYPISFQYEISSNNLLVAAPYGGSIAVTRNPKKLVKVQ
GANKPLILLYASSGKPTAKLQWSSGQLISFGWSQQEELLCVQDDGMVLIYDMFGTYRHTF
SMGNAAKDTKVIDAKFFTTSNSTGIAVLTSTNRIFLVNNVSEPKVRPIADMPRYPIDCWL
MVHCDRETQVILSNREGIFVIHQSHPNTYSFSNLFSNKINNVTAIAVSTNNRHIALYSDT
GHLYIGSIDFREKYCECYTNMKEPLANIAWCGTEAVVCSWNSTIMVVGRTADTIVYNYDG
PVHLVTEIDGVRVLSSSSHEMIQKVPNVVQRIFRINSTDPASYLLEASKQFQKKSHKADS
YIDLVKDKLDSAIKACIDGASHEFDFETQKILMRAAKFGKGFSKTIDSEYYVQMCRILRV
LNAVRHPAVGIPLTCTQFNILTNQVLLDRLVARRHYYLSIQVARHLQLPEIDGESRILAH
WACYKVKQTQLDKEQIAEEIADKLGYAPGVSYSEIAKRAADCGRKQLAIKLIDYEPRARQ
QVPLLLTLGEERAALHKAVESGNTDLVYTVILHLRENMTLGDFQMSIMHCPLAMALYIKY
CQSHNRETLRDIYNQYDDFHSQAVWFITESYQRKNTMSRDALLQSAQENFRLARNDTNAS
LTEEQIKLLKYQRSLEDTLRESVVGKPLHDTVKILLLRNELKLADKLRSEYKIPDRRYWW
LRIQCLAEQGLWNDLEKFSKSKKSPIGYEPFIDECLKYNEKLEARKYLAKVKDDLKVKYL
VKLNLLSEAAQTAYEQKDASALTFVLAQCGSSDRQFVDKINMLLASLKN
NT seq
2490 nt
NT seq
+upstream
nt +downstream
nt
atgtcggcgatgttgactgccgattggtttcccctgggacgagacgtatactttcgcaaa
ttcgagctgtacccgatatccttccagtacgagatttccagcaacaatttgttagtggcg
gctccatacgggggctccattgctgtaacgagaaaccctaagaaactcgtcaaagtccaa
ggagctaacaagcctttaatattgctgtacgcgtcgtcaggaaaaccgacagccaagctg
caatggagcagtggacaactgatatcgttcggttggtcccagcaagaagaattgttatgc
gtgcaagatgatggcatggttctcatatacgacatgttcggaacttatcggcataccttt
agcatgggaaatgcagccaaagataccaaagttatcgacgcaaagttcttcacgacgtcc
aatagtactgggatagccgttttgacgtctaccaatcgtatatttctagtgaacaatgtg
tccgaacctaaagtccgaccaatcgctgatatgccaagatatccaattgattgttggctc
atggtacattgcgacagggagacacaagtaattttgtcgaatagagaaggaatatttgta
attcatcagtcccatccaaacacttattcatttagcaatctcttcagtaataagatcaat
aatgtgacagcgatagctgtgtccaccaacaatcgacacattgcgctttattccgatacc
ggacacttgtacattggttcgatagactttagagagaagtattgtgaatgttatacgaat
atgaaggaaccccttgcaaatatagcttggtgtggtacggaagccgtggtgtgcagctgg
aacagtacgataatggtggtgggacgtacagctgatactatagtgtacaattacgatggt
ccagtacacttggtcacagagattgacggagtgcgtgtgttgtcaagtagttcgcacgaa
atgatacagaaagtaccaaacgtcgttcaaagaatatttagaatcaactcgacggatcct
gcttcctatctcctagaagcttctaagcagtttcagaagaaaagccacaaggccgacagc
tatatagatttagtgaaggataagctggactcggcgataaaagcgtgtattgacggtgcg
agtcacgaatttgatttcgaaacgcaaaagattctgatgagagctgccaagtttggaaaa
ggattcagcaaaacgatagattcagaatattacgttcaaatgtgcaggattttgagagtc
ttgaatgcagtgagacatcccgctgtggggattccgttaacatgtacgcaatttaatatt
ctcacaaatcaagtgctgttagatcggttggtagcacgaagacattattatttaagtata
caagtagcgcgtcacttgcaattacccgagattgatggagaaagtagaatattagcacat
tgggcttgctacaaagtgaaacaaacgcagttagataaggaacaaatagcagaggagatc
gctgataaattaggatacgctcctggtgtttcatatagcgaaatcgcgaaaagagcggcg
gattgcggacgaaagcaattggccataaaattaatcgactacgaaccgcgtgcgcgtcaa
caagtacccttgctgttgacacttggcgaggagcgtgctgctctgcataaagcagtcgaa
agcggcaatacggatttagtctataccgtcattcttcatctcagggaaaatatgactctc
ggagattttcagatgtctataatgcattgtcctctggcaatggcattgtatattaaatat
tgtcagagccataacagagagacattgcgtgatatttacaatcagtacgacgatttccat
tcgcaagcggtgtggtttatcaccgagagttatcaacgaaagaacacgatgtcgagagat
gcgttactgcagtctgctcaggaaaatttcagattagctcgcaatgataccaacgcgtca
ttaacagaagaacagataaaactgttgaagtatcagagatctttagaggacacgctacgc
gaatcggtagtgggaaagcctctgcacgatactgtgaaaatattattactgcgtaacgaa
ttgaaattagcggataaattacgatcagagtataaaataccagatcggagatattggtgg
ttaagaatacaatgcctagcggaacaaggcttatggaatgatttggaaaagttctcgaaa
agtaaaaagtctcccattggctacgagccgtttatagatgaatgcctgaagtataacgaa
aaattagaagcaaggaaatacttagccaaagttaaagatgatcttaaagtaaaatatcta
gtgaagttaaatttgcttagcgaagcggcgcaaacagcgtacgaacaaaaggatgcttcg
gctctcacatttgtgttggcgcaatgcggatcgtcagacagacaattcgtggataagatc
aatatgttactagctagtcttaaaaattaa
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integrated database retrieval system
