Temnothorax americanus: 143906024
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Entry
143906024 CDS
T11456
Name
(RefSeq) DEAD-box helicase Dbp80-like
KO
K18655
ATP-dependent RNA helicase DDX19/DBP5 [EC:
5.6.2.7
]
Organism
tame Temnothorax americanus
Pathway
tame03013
Nucleocytoplasmic transport
tame03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
tame00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
143906024
03015 mRNA surveillance pathway
143906024
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tame03019
]
143906024
Enzymes [BR:
tame01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
143906024
Messenger RNA biogenesis [BR:
tame03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
143906024
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Motif
Other DBs
NCBI-GeneID:
143906024
NCBI-ProteinID:
XP_077277894
LinkDB
All DBs
Position
Unknown
AA seq
354 aa
AA seq
DB search
MASNNVDLEQYDDEQDKLASKVTSLNLDTSKKQISPADEFQKKDPTSPLYSVKTFDELNL
KPALLKGIYVMGFNAPSKIQETALPILLADTAQNMIAQSQSGTGKTAAFVLAMLSRVDPA
KTYPQVLCLSATYELALQTGEVAARMSRFCPEIQIIYAVIGEKIRRGSNITAHIIIGTPG
KVIDWGKKFKLFDLSKISVFVLDEADVVMATQGHQDQCIRIHKSLPRTCQTMFFSATYEP
EVRNFADIIVGNAITIRLSREEESLENIKQYYINCQTLEEKYNAITNIYGAITIGQAIIF
CHTKTTARWLAEKMTKDRHAVAILFGDLTIEQRISVLDRFRAGLERVIVTTNVL
NT seq
1065 nt
NT seq
+upstream
nt +downstream
nt
atggcttcgaataatgtcgatttggaacagtacgacgacgaacaggacaagttggcatcg
aaggtgacgagtttgaacctggatacgtcgaagaagcagatctcaccagcagatgagttt
caaaagaaggatccaacgtcaccgttgtacagcgtcaaaacctttgacgaacttaatctc
aaacctgccttgttaaaaggtatttacgttatgggattcaacgcaccgtcgaaaattcaa
gaaaccgctttacccattttactcgccgatacggcgcagaacatgattgcgcaatcgcaa
tctggtacgggtaagacggccgcgttcgtactcgccatgttgagtcgggtagatcccgca
aaaacgtacccacaggtactttgtttatcggcgacttacgagctggcgctccaaactggc
gaagtagcggcgaggatgtcgcgcttttgccctgaaatacaaattatctatgctgttata
ggagaaaaaataagacgtggatcgaacatcaccgcccacattattataggaactccgggt
aaagtgattgactggggaaaaaagttcaagttgttcgatctaagcaaaatttcggtattt
gtattggacgaagccgacgttgtgatggctacgcaaggccatcaagatcagtgtatacgt
attcacaaatcactgccacgtacgtgtcaaacgatgttcttctctgcgacatacgagcca
gaagtgagaaactttgcggatattatagtcggtaatgcgataacaatacggttatcgaga
gaagaagagagtttggaaaatattaaacagtactatatcaattgccaaacgttggaagaa
aaatataatgctatcacaaatatttatggcgcgatcaccattggacaagccattattttc
tgtcacacgaaaacgacggccaggtggttagcagagaaaatgacgaaagacaggcatgcg
gtagcaatattgtttggggacttgacaattgaacaaaggatttctgtgctggatagattt
agagcaggacttgagagagtgattgtcaccaccaatgttttatag
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