Temnothorax americanus: 143906072
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Entry
143906072 CDS
T11456
Name
(RefSeq) DEAD-box helicase Dbp80-like
KO
K18655
ATP-dependent RNA helicase DDX19/DBP5 [EC:
5.6.2.7
]
Organism
tame Temnothorax americanus
Pathway
tame03013
Nucleocytoplasmic transport
tame03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
tame00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
143906072
03015 mRNA surveillance pathway
143906072
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tame03019
]
143906072
Enzymes [BR:
tame01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
143906072
Messenger RNA biogenesis [BR:
tame03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
143906072
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Motif
Other DBs
NCBI-GeneID:
143906072
NCBI-ProteinID:
XP_077277985
LinkDB
All DBs
Position
Unknown
AA seq
439 aa
AA seq
DB search
MASNNVDLVEEHADERDNLGSKVTASYLWDKAENKYKVMLRKIVQTNNKAYPTSPLYSIE
TFDVLCIKPELLKGAHSMGFNAMSKIQKLALPILIADPAQNMIAQSESGTGKTVAFVMAM
LHRVDPMKLYPQVICLSPTYELAIQTGEVAARMARFCPEIQIMYAVRGERVNPRSEITAH
ILIGTPRKVLEWGLKYCVFDLSRISVFVLDEADVMLATQEDCVTIHRSLPRTCQTMFFSA
TYEPEVRNFADMIAGDALQIRLLREEECLDNIKQYYINCQTSEEKYTAVKNIYDAITIGQ
AIIFCRTKSTARWLAKNMTINGRPVAMLSGDLPMDKRLQVLDKFRHGLYKFIVTTNVLSR
GIDVQRVTLVVNFDLPMNEKKEADFETYLNRIGRTGRFGKSGIAINLIDSPKAWQLCKDI
QIHFGKKIRNLDAEDAAEM
NT seq
1320 nt
NT seq
+upstream
nt +downstream
nt
atggcttcgaataatgtcgacttggtggaagagcacgccgatgaacgggacaacttggga
tcgaaggtgacagcatcctacctgtgggacaaggctgaaaacaaatataaagtgatgctg
agaaaaattgtacagaccaacaacaaggcttatccaacgtccccgttgtattctatagaa
acctttgacgtgctttgcataaaacctgagttattgaaaggtgcccactcaatggggttc
aacgctatgtcgaaaattcaaaaactcgctctaccaattttaatcgccgatccggcgcag
aatatgattgcgcaatcggaatcaggcacaggcaaaacggtcgcctttgtgatggccatg
ttacatcgggtcgatcccatgaaactgtacccccaggtgatttgcttatcaccgacgtat
gaactcgccatacaaacaggcgaagtagcagcgaggatggcgcgcttttgccctgagata
caaattatgtatgctgttcgaggagagcgagtgaatcctcgatcagaaatcaccgcgcat
atattgataggaacgcctcgcaaagtgcttgagtgggggctcaagtactgcgtcttcgat
ttgagtcgcatatccgtgtttgtattggacgaagctgacgtaatgttggctacgcaagaa
gattgcgtaactatacacagatcactgccacgtacgtgtcaaacgatgttcttctctgcg
acatacgagccagaagtgaggaactttgcggatatgatagccggcgatgcgctgcaaata
cgattattgagagaagaagagtgtttggataatatcaaacagtactatatcaattgccaa
acgtcggaggaaaaatataccgctgtcaaaaatatctatgacgcgatcaccattggacaa
gccattattttctgtcggacgaaatcgacggccaggtggttggcaaagaacatgacgatt
aacgggcgccctgtagccatgttatcaggcgatttgccgatggacaaaagactacaagtc
ctagataaatttagacacggactttacaaatttattgtcaccaccaacgttttatcaaga
ggcattgatgtacaacgggtgacgctagtggttaactttgatttgccgatgaatgaaaaa
aaggaagccgattttgagacttacttgaacagaatcggaagaacagggcgattcggaaaa
tcggggatcgccataaatttaatcgactcgcccaaggcatggcaactgtgcaaagacata
cagatacactttggcaagaagatacgtaatcttgacgcggaagatgcggcggagatgtaa
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