Temnothorax americanus: 143906897
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Entry
143906897 CDS
T11456
Symbol
Ref1
Name
(RefSeq) RNA and export factor binding protein 1
KO
K12881
THO complex subunit 4
Organism
tame Temnothorax americanus
Pathway
tame03013
Nucleocytoplasmic transport
tame03015
mRNA surveillance pathway
tame03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tame00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
143906897 (Ref1)
09122 Translation
03013 Nucleocytoplasmic transport
143906897 (Ref1)
03015 mRNA surveillance pathway
143906897 (Ref1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tame03019
]
143906897 (Ref1)
03041 Spliceosome [BR:
tame03041
]
143906897 (Ref1)
Messenger RNA biogenesis [BR:
tame03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
143906897 (Ref1)
TREX complex
143906897 (Ref1)
Spliceosome [BR:
tame03041
]
Complex C
Other components
EJC/TREX
143906897 (Ref1)
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
143906897 (Ref1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
FoP_duplication
Btz
BspA_v
YHR127W_C
Motif
Other DBs
NCBI-GeneID:
143906897
NCBI-ProteinID:
XP_077279378
LinkDB
All DBs
Position
Unknown
AA seq
259 aa
AA seq
DB search
MKMVDKIEMSLDDIIKQTKGSRARGGGGGGGGGGGGGGRRGRGAGSSPRRGARRAQRAGG
GVMRGRNRGGIARSSLPYTRGDVNSAWKHDMFDGVKKVGRGAIGNAGTTKLLVSNLDFGV
SDSDIQELFSEFGPLKSAAVHYDRSGRSLGSADVIFERRADAIKAMKQYHGVPLDGREMN
IQVATSELPVTSVRGGPRLGGVTYTQRPQTRFRGTRGTGSVRGRGSGRRGGRGGIRQATK
TPTAEELDAELEAYVKEVK
NT seq
780 nt
NT seq
+upstream
nt +downstream
nt
atgaagatggtggataagattgaaatgagtctggatgatattatcaaacagaccaaaggg
tctagggcgcgtggcggcggcggcggcggcggtggcggtggtggtggcggcggtagacgc
ggcagaggcgccggcagctcgccccgtcgaggagcacgtagggcacagagagccggtggt
ggcgtcatgcgaggacgcaatcgcggtggtattgcacgtagctctctaccatacacgagg
ggtgatgtaaacagtgcttggaaacacgacatgtttgatggtgtaaagaaggttggtcgt
ggtgcaataggcaatgcaggaacaaccaaacttttggtgtcaaatcttgattttggtgta
tcagactcagacatacaggaattattcagtgaatttggacctttaaaatcagcagcggta
cattatgatagatcaggtcgatctctaggctctgctgatgtcatatttgaaagacgggcg
gatgctattaaagcaatgaagcaatatcatggagtaccgttagatggtcgtgaaatgaac
atacaagtagctacttccgaactaccagtcacttctgtccgtggtggcccgagacttggc
ggtgttacgtatacacaaagacctcagacacgttttaggggaacgcgtggtacaggatct
gttagaggtcgtgggagtggtcggcgtggaggtagaggtggcattcgacaagcgacaaag
acacctacggccgaagaattagatgcagaactggaagcttatgtgaaagaagtcaagtaa
DBGET
integrated database retrieval system
