Temnothorax americanus: 143906955
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Entry
143906955 CDS
T11456
Symbol
Dnalig3
Name
(RefSeq) DNA ligase 3 isoform X1
KO
K10776
DNA ligase 3 [EC:
6.5.1.1
]
Organism
tame Temnothorax americanus
Pathway
tame03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
tame00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
143906955 (Dnalig3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tame03400
]
143906955 (Dnalig3)
Enzymes [BR:
tame01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
143906955 (Dnalig3)
DNA repair and recombination proteins [BR:
tame03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Short Patch-BER factors
143906955 (Dnalig3)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_N
zf-PARP
DNA_ligase_A_C
RNA_ligase
LIG3_BRCT
BRCT
Motif
Other DBs
NCBI-GeneID:
143906955
NCBI-ProteinID:
XP_077279485
LinkDB
All DBs
Position
Unknown
AA seq
1015 aa
AA seq
DB search
MSSDEEDQRQQQQEEEKPFAVERAKTGRAKCKKCKCPIEKGEIRIAKYVTSFFSDGKLMP
AWHHVTCLFDVFAKQRATTKKIDDPAEDAKGWEQLSDDDRKVILDKLEAFEKSFPAKGAK
KTTSPRKAASSSSNPSGKTVKKNLDRKKVATDDKEKDKEKDKERKSKIPSKDDSFREFRR
ICSNVADVDAYTDKTAIIKRMFTKGSLGDGFKGDIVLWCKLLLPGAVKRIYNLQSKQLIK
LFARLLLQDEDAMLEHLEQGDVAETIGVFFENSAAVSPCAASVLTIQDVDLFLENLSRLT
KEEEQIQHFRSILDKCTANDLKMIVRLIKHDLRINAGPKHILEGLHADAYKAFQMSRDLE
AVVRRFLPNLEDKPHASSSPLSRKKVAISLMTPVLPMLAEACTSVEMAMRKCPNGMLSEV
KYDGERVQVHKCGNDFRYFSRSLKPVLPHKVNLFKDYIVQAFPDGDDLILDSEVLMVDNE
TGQPLPFGTLGIHKKAEFKNANVCLFVFDCLYYNSEILIDKSMLERRNILKDRMTEIPNR
IMLSEVHEVHDPRDLAEKIVQVLKLGLEGLVLKDIDSKYEPGKRHWLKVKKDYLCGGAMA
DSADLVVLGAWYGTGNKGGILSVFLMGCYDERRGKWLTVTKVHTGHDDATLALLQDQLDM
VKIGKDAEKLPSWLLAKKPMIPDFVARDPKKQPVWEITGAEFTNQGVHTADGISIRFPRV
TRIRHDKDWSTATTLNELRRLFQKKPESADFDRLFGTLADVKDVSRRKKLPDSANTSPRK
NESVKTASWDVPSTSSKVKEEPMDVKKEVKRIPLPEETRKRQKGDECDDGSSDKVRSEKK
KAKVKRDIKDEMEDFPSTRFKKEGRLEIKRQREDCIDHFASGTEGSFESSFDASVFDSDT
EDIKFNNVLQDTRVSLAPDFDTSRRKDARRMLKTLGATIVMPANGHDLTATHVIHTRAEI
PSSAVLGDFTDFPRTAKHVNVSWVEETAARSRRQDEVRHAVQLTGDYCDCPCTHR
NT seq
3048 nt
NT seq
+upstream
nt +downstream
nt
atgtccagcgatgaggaggatcaacggcagcaacagcaggaggaagagaaaccgttcgcc
gtggaacgcgcgaaaaccggccgcgcaaaatgtaagaagtgcaaatgtccgatcgagaag
ggcgagatacggatcgccaagtacgtgacgagcttcttctcggacggcaaactgatgccg
gcctggcaccacgtcacctgtctgttcgacgtgttcgcgaaacaacgtgccaccaccaag
aagatcgacgatcccgcggaggacgcgaagggttgggagcaattgtccgacgacgacaga
aaggtcattttggacaagctggaggcattcgaaaaatcatttccggcaaagggtgcgaag
aagaccacatcgccacgtaaagcggcctcctcttctagtaatccttcggggaaaacagtg
aagaagaatttagatcggaagaaggttgcaacggatgataaagaaaaagataaagagaaa
gacaaggagagaaagagcaaaatcccgtcgaaggatgattcctttcgcgaatttcgacgt
atatgcagcaacgtcgccgacgtcgacgcttacaccgacaagactgcgattattaagagg
atgttcacaaaaggatcactcggagacggttttaagggcgacatcgtgctctggtgcaaa
ctgttgctgcccggcgcggtgaagagaatttacaatctgcagagcaagcagctgataaaa
ttgttcgcgcgattgctgctccaggacgaggacgcgatgctggaacatctggagcaaggc
gacgtggccgagacgatcggcgtgttctttgaaaatagcgctgccgtgtcgccttgcgcc
gcgagcgtgttgacaattcaagacgtcgatctctttttggaaaacttgtcgcgtttgacc
aaggaagaggagcagatccagcattttcgatctatccttgataaatgtaccgccaacgat
ctgaagatgatcgtgcgtctgatcaaacacgatctgagaatcaacgccggaccgaaacat
attctcgaggggctccatgcggatgcgtacaaggccttccagatgtcccgagatctggaa
gcggtagtgcgacgtttcctgccgaatctggaggataaaccgcatgcctcgagctcgccc
ttaagccggaaaaaagtggccatttcgctgatgacgcccgttttaccgatgctggcagag
gcgtgcacgtccgtggaaatggcgatgcgaaagtgcccgaacggaatgttgtcggaggtc
aagtacgacggcgagcgcgtgcaggtgcacaaatgcggaaacgactttcgatacttcagc
agatccctcaagccggtcctgccgcacaaggtgaatctcttcaaggattatatagtgcag
gcgtttcctgatggcgacgatctaatcctcgattctgaggttctcatggttgacaatgag
accgggcaacctttgcctttcggcaccttaggaattcataaaaaagccgaattcaaaaac
gccaatgtatgtctttttgtcttcgactgcttatattacaacagcgagatacttatagac
aaatctatgttggagcgcaggaacatcttgaaggacaggatgaccgagataccgaacaga
ataatgttgtcggaggttcacgaagtgcatgatccacgggatttagcggagaagattgtt
caagtgttgaaactgggtctcgagggtttggttctgaaggacatcgatagcaaatacgag
ccgggcaagaggcactggttgaaggtaaaaaaggactatctgtgtggtggtgcgatggct
gatagcgcagatctcgtcgtacttggtgcatggtacggcacgggcaacaaaggcggcatt
ctgtcggtctttttaatgggctgctacgacgagaggcgcggcaagtggttaaccgttacc
aaagtacacactggacacgacgatgccaccctggcgttattacaagaccagctggacatg
gtgaagatcggcaaagacgcggagaagctaccgagctggttacttgccaaaaaacccatg
ataccggatttcgtggcgagagatcccaagaaacagccagtatgggagataacgggagcc
gagtttacgaatcaaggagtgcatactgcagacgggatcagcatccggtttccgcgtgtc
acgcggatccgccacgacaaggactggtcgacggccaccaccctgaacgagttgcgtcgc
cttttccagaagaagcccgaatccgccgatttcgatcgcttgttcggtacgttagcggat
gtcaaggacgtctcaaggaggaagaagctgcctgattctgcgaacacgtcgccgaggaag
aacgagagcgtgaaaacagcctcgtgggatgtgccatcaacgagttccaaggtcaaggag
gagccgatggatgtcaagaaggaagttaagaggataccacttccggaagaaacccgaaaa
agacaaaagggagatgaatgcgacgatggatcatccgacaaagtccggtcagagaagaag
aaagcgaaagtgaaacgcgatattaaggacgaaatggaggatttcccgtcaacaaggttc
aagaaagaggggagattggagataaaacggcaaagggaggattgcattgatcatttcgct
agcggaacagaaggatctttcgagtcttcgttcgatgcgagtgtctttgattcggacacc
gaggatatcaaattcaataatgtactgcaagacacgcgagtgagtctcgcgcctgatttc
gatacaagcaggaggaaggacgcacgaaggatgcttaaaacactcggtgccaccatagtt
atgccggcgaacggacacgatttgacggcgactcatgtcattcatacacgcgcagaaatt
ccgtcctcggccgtcctcggggactttacggactttccgcggaccgccaagcacgtgaac
gtgtcttgggtggaggaaactgcggcgcggtcgaggaggcaggatgaggtccggcacgcg
gtccagctgactggagattattgcgattgtccgtgcacgcatcgataa
DBGET
integrated database retrieval system
